Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_3565 |
Symbol | |
ID | 4599444 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 3781262 |
End bp | 3782014 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639778173 |
Product | integrase catalytic subunit |
Protein accession | YP_924752 |
Protein GI | 119717787 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACCCG AGGGGCTCTA CGGGCGTCGG AAGATGACCG CGCTGGTGCA GCGCACGTCG CCCGAGGCAT CGCCCGGCAG CGTGGACCGG GCGATGAGAA CCCTGTCCCT GCAAGGGGTT CGGCGTTCGA AGGGGATCCG GACCACGATC CCGGCCAAGG ACGGCAAGCG AGCCGGTGAC CTGCTGGATC GCGACTTCAC CGCCGAAGCG CCGAACAGGA CCTGGGTCAT GGACTTCACC TACGTGAGAA CCTGGGCCGG GTTCGTCTAC GTCGCGTTCA TCCTCGACGT GTTCGCCCAG AAGATCGTCG CCTGGAACGT CGCGCCCACC AAGGCCGTCG AGTTGGTCGA CGTCCCGCTG CGAATGGCGT TGTGGCAACG CGACCGCGAG GGCCACCCGA TCGTGCCCGG CGAACTGATC GGCCACGCCG ACGCCGGATC GCAATACACC TCGATCACCT TCACCGAACA CCTCGCCGAG GAAGGCATCC GGCCCTCGAT CGGGACGGTT GCCGATGCCT ATGACAACGC CCTGATGGAG TGCGTGATCG GGCTCTACAA GACCGAGTGC ATCCGCACCA CGGTCTTCCA CGCCGGCCCC TACCGGACCA TCGGCGACGT CGAGTACGCC ACCGCCGGCT GGGTCGACTG GTACAACAAC AGGCGCCTGC ACGGCTCGCT TGGGATGATG ACCCCAGTGG AGTTCGAGCA GGCCCACTAC GCGACTCTCA ACCGAGAGCC GCAACCCGCA TAG
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Protein sequence | MTPEGLYGRR KMTALVQRTS PEASPGSVDR AMRTLSLQGV RRSKGIRTTI PAKDGKRAGD LLDRDFTAEA PNRTWVMDFT YVRTWAGFVY VAFILDVFAQ KIVAWNVAPT KAVELVDVPL RMALWQRDRE GHPIVPGELI GHADAGSQYT SITFTEHLAE EGIRPSIGTV ADAYDNALME CVIGLYKTEC IRTTVFHAGP YRTIGDVEYA TAGWVDWYNN RRLHGSLGMM TPVEFEQAHY ATLNREPQPA
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