| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3552 |
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| Symbol | sdhA |
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| ID | 4599431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 3766131 |
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| End bp | 3768149 |
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| Gene Length | 2019 bp |
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| Protein Length | 672 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639778160 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_924739 |
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| Protein GI | 119717774 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01811] succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGGACA CCACTCTCAC GCCCGAGCCC AGCCACGACG CGCCCGGCGC GCACGGCGAC
GACGCCGCGG GCTACTACCG CCCCGGCGAC CCGGTCGCCG ACGCGAAGGC TCCCGACGGC
CCGATCGCGG AGCGGTGGAA CACCCGCAAG TTCGAGGCCC GCCTGGTCAA CCCGTCCAAC
CGGCGCAAGC TCGACGTGAT CATCATCGGC ACCGGCCTGG CCGGGGGCGC CGCCGCCGCC
ACCCTGGGCG AGGCCGGCTA CAACGTGAAG TCCTTCTGCT ACCAGGACTC CCCGCGCCGG
GCCCACTCGA TCGCCGCCCA GGGCGGCATC AACGCGGCCA AGAACTACAA GGAGGACGGC
GACTCCGTCT ACCGGCTGTT CTACGACACG GTCAAGGGCG GCGACTACCG CTCGCGGGAG
TCGAACGTCT ACCGCCTGTC CGAGGTCAGC TCGAACATCA TCGACCAGTG CGTCGCGCAG
GGCGTCCCCT TCGCCCGCGA GTACGGCGGC CTCCTCGACA ACCGCTCGTT CGGCGGCGTG
CAGGTCTCCC GCACGTTCTA CGCCCGCGGG CAGACCGGCC AGCAGCTCCT GATCGGGGCC
TACCAGGCGA TGGAGCGCCA GGTCGCGGCC GGCACCGTCA CCCAGTACAC CCGCCACGAG
ATGCTGGAGC TGATCGTCGC CGACGGCCGG GCCCGCGGCA TCATCGCCCG CGACATGGTC
ACCGGCGAGA TCCAGACCCA CCTCGCCGAC GTGGTGGTGC TGGCCAGCGG CGGCTACGGC
AACGTCTTCT ACCTCTCGAC GAACGCCATG GGCTCCAACG TCACCGCCAG CTGGCGGGCG
CACCGCAAGG GCGCGTACTT CGCGAACCCC TGCTACACCC AGATCCACCC GACCTGCATC
CCGGTCTCGG GATCGCACCA GTCCAAGCTG ACCCTGATGT CGGAGTCGCT GCGCAACGAC
GGCCGGATCT GGGTCCCGAA GAACAAGGCG GACTGCGACA AGGACCCGCG CACGATCCCC
GAGGAGGCCC GCGACTACTA CCTGGAGCGG ATCTACCCCT CGTTCGGCAA CCTGGTCCCC
CGCGACATCG CCTCGCGCGG CGCGAAGAAC GTCTGCGACG AGGGCCGCGG CGTCGGCCCG
GAGGTCGACG GCGTGCGCCG CGGCGTCTAC CTCGACTTCA AGGACTCGAT CGGCCGCCTG
GGCGAGGACG CCGTGCGGGA GAAGTACGGC AACCTCTTCG ACATGTACCT GCGGATCACG
GGTGAGAACC CGTACGAGGT CCCGATGCGG ATCTACCCCG CGGTGCACTA CACGATGGGC
GGCCTGTGGG TCGACTACGA CCTCCAGTCG TCGATCCCCG GCCTGTTCGT GGCCGGCGAG
GCGAACTTCT CCGACCATGG CGCCAACCGG CTCGGCGCGT CGGCACTGAT GCAGGGCCTC
GCGGACGGCT ACTTCGTGCT GCCCCAGACG ATCCGCGACT ACCTCGCGGA CGGGCCGTTC
GACAAGATCG CCGAGGACCA CCCGTCGGTG GTGGAGGCCA AGAAGTCCGT CGAGGACCGG
GTCGCCCACT TCCTGAACAC CAACGGCACC CGCAGCGTCG ACTCCTACCA CCGCGAGCTC
GGCAACATCA TGTGGGAGTA CTGCGGCATG GAGCGGACCG CGGACGGCCT GAAGAAGGCG
ATCGACCTGA TCCGCAGCCT GCGCGAGGAC TTCTGGCGCA ACGTCAAGGT CCTCGGCACC
GCCGACAGCC TCAACCAGTC CCTGGAGAAG GCCGGCCGGG TGGCCGACTT CTTCGAGCTC
GGTGAGCTCA TGTGCATCGA CGCGCTCAAC CGGCGCGAGT CCTGCGGCGG CCACTTCCGG
GCCGAGTCGC AGACCGAGGA CGGCGAGGCG CTTCGCCACG ACGACCACTT CGCGTACGTC
GCGGCCTGGG AGTTCGCCGG CGACGGCGAG CTGCCGGTAC TGCACAAGGA AGACCTCGTC
TACACGGCCA TCGAGATGAA GCAGCGGAGC TACAAGTAA
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| Protein sequence | MPDTTLTPEP SHDAPGAHGD DAAGYYRPGD PVADAKAPDG PIAERWNTRK FEARLVNPSN
RRKLDVIIIG TGLAGGAAAA TLGEAGYNVK SFCYQDSPRR AHSIAAQGGI NAAKNYKEDG
DSVYRLFYDT VKGGDYRSRE SNVYRLSEVS SNIIDQCVAQ GVPFAREYGG LLDNRSFGGV
QVSRTFYARG QTGQQLLIGA YQAMERQVAA GTVTQYTRHE MLELIVADGR ARGIIARDMV
TGEIQTHLAD VVVLASGGYG NVFYLSTNAM GSNVTASWRA HRKGAYFANP CYTQIHPTCI
PVSGSHQSKL TLMSESLRND GRIWVPKNKA DCDKDPRTIP EEARDYYLER IYPSFGNLVP
RDIASRGAKN VCDEGRGVGP EVDGVRRGVY LDFKDSIGRL GEDAVREKYG NLFDMYLRIT
GENPYEVPMR IYPAVHYTMG GLWVDYDLQS SIPGLFVAGE ANFSDHGANR LGASALMQGL
ADGYFVLPQT IRDYLADGPF DKIAEDHPSV VEAKKSVEDR VAHFLNTNGT RSVDSYHREL
GNIMWEYCGM ERTADGLKKA IDLIRSLRED FWRNVKVLGT ADSLNQSLEK AGRVADFFEL
GELMCIDALN RRESCGGHFR AESQTEDGEA LRHDDHFAYV AAWEFAGDGE LPVLHKEDLV
YTAIEMKQRS YK
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