Gene Noca_3549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_3549 
Symbol 
ID4599428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp3763276 
End bp3764109 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content68% 
IMG OID639778157 
Productintegral membrane protein 
Protein accessionYP_924736 
Protein GI119717771 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCGATGG CGTCGACGGA CGCACCCAGC ACGACCCCAG GATCGACAGG TGTGGACGGG 
CCCACGCGAG CCCGGATCGG CGCGAGGACG TTGCGCGAGG ACCGGTGGTG GCTCGTGCCG
CTCGCCACGT TCGTCGTGTT CAGCGGCTTC GTCCTGTTCG CCACCTACCG GGCGTTCGCG
GGCGACAACT TCTACTCCGA GCCGTACCTC TCGCCGTTCT TCTCGCCCTG CCTCACGGCG
GACTGCGTGG CCGGGTCCTC GGACTTCGGC CGACCGCTGT CGTGGTGGAA CCTGTCGCCG
GCGCTGGTGA TCCTGATCTT CCCGCTGGGC TTCCGGATGA CGTGCTACTA CTACCGCAAG
GCGTACTACC GCGCGTTCTG GCTCTCCCCG CCCGCGTGCG CGGTCGCCGA GCCGCACGGC
GCCTACTCCG GCGAGACCCG CTTCCCGCTG ATCCTGCAGA ACCTGCACCG CTGGTTCTGG
TACGCCGCCG TGGTGATCGC GCTGATCCTG ACCTGGGACA CGGTGCTGGC CTTCGGCCCG
GCACCGGGTG AGCCCGACGG GATCCACATG GGCCTGGGCA CCCTGCTGAT GATCGCCAAC
GTGGTGCTGA TCTGGCTGTA CACGCTCGGC TGCCACTCCT GCCGTCACAT CACGGGCGGC
CGGCTCCGGC ACTTCTCCAA GCACCCGGTC CGCTACCGGA TGTGGACGCT GGTCTCGAGG
CTGAACGCCC GGCACGGCAC CTACGCGTGG TACTCGCTGT TCTCGGTCGC GATCGTGGAC
TTCTACATCT ACCTGCTCGC CACCGGGGCC TTCGACGACC CGAGGTTCTT TTGA
 
Protein sequence
MAMASTDAPS TTPGSTGVDG PTRARIGART LREDRWWLVP LATFVVFSGF VLFATYRAFA 
GDNFYSEPYL SPFFSPCLTA DCVAGSSDFG RPLSWWNLSP ALVILIFPLG FRMTCYYYRK
AYYRAFWLSP PACAVAEPHG AYSGETRFPL ILQNLHRWFW YAAVVIALIL TWDTVLAFGP
APGEPDGIHM GLGTLLMIAN VVLIWLYTLG CHSCRHITGG RLRHFSKHPV RYRMWTLVSR
LNARHGTYAW YSLFSVAIVD FYIYLLATGA FDDPRFF