| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3544 |
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| Symbol | |
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| ID | 4595726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 3755792 |
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| End bp | 3757954 |
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| Gene Length | 2163 bp |
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| Protein Length | 720 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639778152 |
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| Product | methylmalonyl-CoA mutase |
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| Protein accession | YP_924731 |
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| Protein GI | 119717766 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit
[COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.143219 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCGTCC CCAAGACCTT CCGCGGGCTG CCGCTCACCG GCGGCGCGGC GGGCGCCGCC
GACGAGGGGG CCGACCGCAC CTGGCTGGCC CCCGAAGGCA TCGACATCAA GGGGCTCTAC
ACGCCCGCCG ACCTCGAGGG CCTCGACGCC CTCGACACGC TGCCGGGCCT GAGCCCGTTC
CTGCGCGGCC CCTACCCGAC GATGTACACC ACCCAGCCGT GGACCATCCG GCAGTACGCC
GGCTTCTCCA CCGCGGAGGA GTCCAACGCG TTCTACCGCC GCAACCTCGC GGCCGGCCAG
AAGGGCCTCA GCGTCGCGTT CGACCTGGCC ACCCACCGCG GCTACGACTC CGACCACCCG
CGGGTCCGCG GCGACGTCGG CATGGCCGGT GTCGCCATCG ACTCGATCTA CGACGCCCGC
ACGCTGTTCG ACGGCATCCC GCTCGACGCG ATGTCGGTCT CGATGACCAT GAACGGCGCG
GTGCTGCCGA TCATGGCGCT CTACATCGCG GCGGCCGAGG AGCAGGGGGT GAAGCCTTCG
CTGCTCGCGG GGACCATCCA GAACGACATC CTCAAGGAGT TCATGGTCCG CAACACCTAC
ATCTACCCGC CGGCCCCGAG CATGCGGATC ATCAGCGACA TCTTCCGGTA CACCGCCGAG
CGGATGCCGC GCTTCAACTC GATCTCGATC TCCGGGTACC ACATGCAGGA GGCGGGGGCC
ACCAACGACC TGGAGCTGGC CTACACGCTG GCCGACGGTG TCGAGTACAT CCGGGCCGGC
CTGTCCGCGG GGCTCGACAT CGACCGGTTC GCGCCGCGGC TGTCGTTCTT CTGGGCGATC
GGCATGAACT TCTTCATGGA GGTCGCGAAG ATGCGCGCCG CGCGGGCCCT GTGGGCCCGG
CTGGTGCGCC AGTTCGACCC GCAGAACCCC AAGTCGCTCA GCCTGCGCAC CCACAGCCAG
ACCTCCGGCT GGTCGCTGAC CGCGCAGGAC GTCTTCAACA ACGTCGGACG CACCTGCATC
GAGGCGATGG CGGCGACCCA GGGACACACC CAGTCGCTGC ACACCAACGC ACTGGACGAG
GCGATCGCGC TGCCGACCGA CTTCTCGGCC CGGATCGCCC GCAACACCCA GCTGCTGCTC
CAGCAGGAGA GCGGCACCAC CGGCACCATC GACCCGTGGG CCGGCTCCTA CTACGTGGAG
CGGCTGACCC ACGATCTCGC CGAGCGGGCC TGGGCGCACA TCCTCGAGGC CGAGGAAGCC
GGTGGCATGG CGGCCGCGAT CGAGCAGGGC ATCCCGAAGA TGCGCATCGA GGAGGCTGCC
GCCCGCACGC AGGCGCGGAT CGACGCAGGC AGCCAGAAGG TGATCGGCGT CAACACCTAC
CGGCTGGCGG CCGAGGACAA GCTGGACGTG CTCAAGGTCG ACAACGACGA CGTCTATCGC
CAGCAGATCG CCAAGCTCGA GCGGCTCCGG GCCGAGCGCG ACGACCACGA GGTCGAGCGC
ACCCTCGAGG CGCTGACCAA CGCCGCCGAC CAGGGCCCCT CGAGCAGCCT CGACGGGAAC
CTGCTCGCGC TCGCGGTCGA CGCCGCCCGC GCGAAGGCGA CCGTGGGGGA GATCTCCGCA
GCGCTGGAGA AGGTGTACGG GCGGCACCAG GCCGTGATCC GTACCATCAG CGGCGTGTAC
AGGGCCGAGG CGGACCGGGC CGGCGACGCG GTCGTCGCCC AGGTGCTGGA GGAGACCGAG
CGGTTCGAGG AGGCCGAGGG CCGGCGCCCG CGGATCCTCG TCGCGAAGAT GGGCCAGGAC
GGCCACGACC GCGGCCAGAA GGTCGTGGTC AGCGCGTTCG CCGACCTGGG CTTCGACGTG
GACGTGGGGC CGCTGTTCTC CACGCCCGAG GAGGTCGCCC AGCAGGCGGT GGACGCGGAC
GTCCACATCG TGGGGGTCTC CTCGCTCGCG GCCGGCCACC TGACGCTGCT GCCCGCGCTG
AAGAAGGCGC TGGCCGACCA GGGCCGGCCG GACATCATGA TCGTGATCGG CGGGGTGATC
CCGCCCGACG ACGTGGCGAC GCTGATGGAG ATGGGCGCCG CCGCGGTGTT CCTGCCCGGC
ACGGTCATCG CCGGGTCCGC CCTCGACCTG CTGGCCCGGC TGCGCGAGCA GCTCGGCCAC
TGA
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| Protein sequence | MTVPKTFRGL PLTGGAAGAA DEGADRTWLA PEGIDIKGLY TPADLEGLDA LDTLPGLSPF
LRGPYPTMYT TQPWTIRQYA GFSTAEESNA FYRRNLAAGQ KGLSVAFDLA THRGYDSDHP
RVRGDVGMAG VAIDSIYDAR TLFDGIPLDA MSVSMTMNGA VLPIMALYIA AAEEQGVKPS
LLAGTIQNDI LKEFMVRNTY IYPPAPSMRI ISDIFRYTAE RMPRFNSISI SGYHMQEAGA
TNDLELAYTL ADGVEYIRAG LSAGLDIDRF APRLSFFWAI GMNFFMEVAK MRAARALWAR
LVRQFDPQNP KSLSLRTHSQ TSGWSLTAQD VFNNVGRTCI EAMAATQGHT QSLHTNALDE
AIALPTDFSA RIARNTQLLL QQESGTTGTI DPWAGSYYVE RLTHDLAERA WAHILEAEEA
GGMAAAIEQG IPKMRIEEAA ARTQARIDAG SQKVIGVNTY RLAAEDKLDV LKVDNDDVYR
QQIAKLERLR AERDDHEVER TLEALTNAAD QGPSSSLDGN LLALAVDAAR AKATVGEISA
ALEKVYGRHQ AVIRTISGVY RAEADRAGDA VVAQVLEETE RFEEAEGRRP RILVAKMGQD
GHDRGQKVVV SAFADLGFDV DVGPLFSTPE EVAQQAVDAD VHIVGVSSLA AGHLTLLPAL
KKALADQGRP DIMIVIGGVI PPDDVATLME MGAAAVFLPG TVIAGSALDL LARLREQLGH
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