Gene Noca_3508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_3508 
Symbol 
ID4595607 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand- 
Start bp3715715 
End bp3716317 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content73% 
IMG OID639778116 
Productregulatory protein, TetR 
Protein accessionYP_924695 
Protein GI119717730 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0988004 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCCCGC GGCACGCCCC CGTGCAAGAC CGCTCCCGGG CTATGGTCGA CCGGCTCCTC 
GAGGCGGCCA CTCGCGTCCT CGCCGAGCGC GGGTACGCCG GATTGAGCAC CAACCGGGTC 
GCGGCCGTGG CCGGGGTCAG CGTCGGCTCG CTCTACCGCT ACTTCGGCGA CAAGGACGAC 
CTGGTGCGCG AGCTGCGGGT CCGCAGCACC GCGGACATCC TGGCCGATCT CACGACGGTG 
CTGTCCGCAG CGGCGCCGCT GGCCACCCGC GACGCGATCC GCGAGGTCAT CGCGACCCTG 
GTGGCCGCCC TGCAACGGCA CCGGGCCCTC ACCGCAGCGC TGGTCAACGA GGTGCCGCTC 
GGCGCGCAGA GCAACGTGCT GCCCGAGGTG GAGCAGCAGC TGGCGCAGTT CACCCGGATG 
TTCGTCGCGA TCCACGCCCC GCACCTGGAG CCGGCCGAGG CCGAGGCGCG CATCTACCTC 
GCGCTCGGGG TCACGTTGAG CAGCTGCCTG CGGATCGCGC TCGATCCGCC CGTCGGGATC 
CCCGAGCAGC GCCTCGTCGA CCTGACGGCC GACCTGCTGC ACACCGGCCT GGTCCTGTCC 
TGA
 
Protein sequence
MGPRHAPVQD RSRAMVDRLL EAATRVLAER GYAGLSTNRV AAVAGVSVGS LYRYFGDKDD 
LVRELRVRST ADILADLTTV LSAAAPLATR DAIREVIATL VAALQRHRAL TAALVNEVPL 
GAQSNVLPEV EQQLAQFTRM FVAIHAPHLE PAEAEARIYL ALGVTLSSCL RIALDPPVGI 
PEQRLVDLTA DLLHTGLVLS