Gene Noca_3500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_3500 
Symbol 
ID4595599 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp3708480 
End bp3709550 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content71% 
IMG OID639778108 
Productresponse regulator receiver 
Protein accessionYP_924687 
Protein GI119717722 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGGCGG GCAGCGACTG GGTGGCAGTC ATCATCGAGG ATGACCCAGA TGTGCGCGAC 
CTGATCGACA TCGTGCTGAC CCAGTCCGGG TTCCGCACGG TCGTCACGGA GAACGGCCCG
GACGGGGTGG AGGCGGTGCG CCAGCACAAC CCGCTGCTCA CCACGCTCGA CGTGAACATG
CCCGGGATGG ACGGCTTCGC CGCGGCCAAG CGGCTGCGGG AGTTCAGCAA CACCTACCTG
ATCATGATCA CCGCGCTCGC CGACGAGATC GACGTCGTAC AGGGCTTCGA GGCCGGTGCC
GACGACTACC TGGTCAAGCC GTTCCGGCCG CGTGAACTGC GGGCCCGCGC GGACTCGATG
CTGCGTCGTC CGCGGACCCG CTACGACACG CCCGCGGGCT GGGCGGACGA TGACGGCCAG
GCCGTGGAGC ACCACCCCCA TCAAGAGTCC TGGGCGGCCG CCGCGGCCCG CGACCTCGCT
GCCAACCATC CACTGCAGCC GATCCACCTC GAGCCGATTC CTCCGGCCCA GCAGCCGGCT
CCGCCGCTTG CGCCTCAGCC TCAGCAGCCG GCGCCGCAGC CCTACCAGCC GGCGCCGCCC
GTCGAGCCGG TCTACCAGCA GCCGCAGCAC TACCCGCCCG CGACGTACCA GCAGCCGCCG
CAGCAGCAGC CGGTGCCGCT GCAGCAGGCT CCGGCGTACC CGCAGCACGC TGCGGACGCG
GCCGGGGCAC CGCACGCCGA CGGTGGCTGG GTCCGCCTGA ACGGGCTCGC CCTCAACAAC
GAGACCCGGG TCGTCACCGT CAACGGCGCA GCGGTGGACC TGACCCGCAC CGAGTTCGAC
CTGCTCGCCT CGCTGCTGAG TACCGGCCGG CGGGTGCGCA GCAAGGCCGA CCTGGTGCTC
ACCATGCGCG GCCAGCAGTA CGTCACGTCG TACTTCGTGA ACGAGGCCGA CAAGCGCTCG
GTCGAGGTAC ACATCGCGAA CCTGCGCCGC AAGATCGGCG ACGACGCGGC CACGCCGCGC
TACATCGAGA CGGTCCGCGG CGTCGGCTAC CGGCTCGCCG AGTCCGTCTG A
 
Protein sequence
MQAGSDWVAV IIEDDPDVRD LIDIVLTQSG FRTVVTENGP DGVEAVRQHN PLLTTLDVNM 
PGMDGFAAAK RLREFSNTYL IMITALADEI DVVQGFEAGA DDYLVKPFRP RELRARADSM
LRRPRTRYDT PAGWADDDGQ AVEHHPHQES WAAAAARDLA ANHPLQPIHL EPIPPAQQPA
PPLAPQPQQP APQPYQPAPP VEPVYQQPQH YPPATYQQPP QQQPVPLQQA PAYPQHAADA
AGAPHADGGW VRLNGLALNN ETRVVTVNGA AVDLTRTEFD LLASLLSTGR RVRSKADLVL
TMRGQQYVTS YFVNEADKRS VEVHIANLRR KIGDDAATPR YIETVRGVGY RLAESV