Gene Noca_3493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_3493 
Symbol 
ID4595592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp3702111 
End bp3702611 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content67% 
IMG OID639778101 
Productmembrane-flanked domain-containing protein 
Protein accessionYP_924680 
Protein GI119717715 
COG category[S] Function unknown 
COG ID[COG3428] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCATCT CGCACAAGCT GCTGAACGAG GGTGAGACCG TCGTCGTCGA CACCCGTACG 
CACGTCAAGG CGCTGATCGT CCCGCTCCTC GTCCTGGTCG TCCTGCTGGC GATCGGCACC
TTCGTCCAGG TCCAGTGGGA CCAGACGCTC GCGTACGTGG TGTGGGCGGT CGTGGCGGTC
GGGATCATCT GGTACGTGCT GCGCCCGGCG ATCATCTGGG CGACCGCGTC GTACACGTTC
ACGAACCGGC GGCTGATCAC CCGCAGCGGC GTGCTCGTGC GGCGGGGCCA CGACATGCCG
CTGGCGCGGA TCAGCGACAT CGCCTACGAG TTCGGGTTGA TCGACCGGAT GCTCGGCTGC
GGGACGCTGA TCATCTCCGA CGCCAGCGAG CACGGGCAGA TCCGGCTGCA CGACATCCCG
CGGGTCGAGG AGACCCAGCG CAAGGTCAAC GCCATGCTGC AGAGCCTCAA CCACCCCTCG
GCAGGACATG ACGGGACCTG A
 
Protein sequence
MAISHKLLNE GETVVVDTRT HVKALIVPLL VLVVLLAIGT FVQVQWDQTL AYVVWAVVAV 
GIIWYVLRPA IIWATASYTF TNRRLITRSG VLVRRGHDMP LARISDIAYE FGLIDRMLGC
GTLIISDASE HGQIRLHDIP RVEETQRKVN AMLQSLNHPS AGHDGT