| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3490 |
|---|
| Symbol | |
|---|
| ID | 4595589 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | - |
|---|
| Start bp | 3699351 |
|---|
| End bp | 3700550 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 639778098 |
|---|
| Product | phosphoribosylaminoimidazole carboxylase ATPase subunit |
|---|
| Protein accession | YP_924677 |
|---|
| Protein GI | 119717712 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0026] Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) |
|---|
| TIGRFAM ID | [TIGR01161] phosphoribosylaminoimidazole carboxylase, PurK protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.574307 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCCAGCC CCGGTGAGTC CAGCCCCGAG CGTCGGCTCG GCCAGCGGAT GGCCCCCACC
CTCGCCGTGA TCGGCGGCGG CCAGCTGGCC CGGATGATGG CCGCCCCGGC CAACGCACTC
GGGCTCCCGC TGCGCCTGCT GGCGGAGGGG GAGGGCGTCT CGGCGGCCCA GGTGATCCCC
GACCACGTGG TCGGGGACTA CCGCGACCTC GAGACCCTGC GGAAGGTCAC CTCCGGCTGC
CCGGTCGTCA CCTTCGACCA CGAGCACGTG CCCACCGGGC ACCTCCACGC GCTGGAGGAG
GACGGCGTCG CGGTGCGGCC CGGGCCGCAC GCCCTGGTGC ACGCCCAGGA CAAGGCGGTG
ATGCGAGAGC GCCTCGGCGA GCTCGGCGTG CCCTGCCCCC GCAACGCCCT GGTCAGGACC
GTCGAGGACG TGGCGGCCTT CGGGTTCCCG TGCGTACTGA AGACCTCGCG GGGCGGTTAC
GACGGCAAGG GCGTGTGGTT CGTCCGCTCG GTCGGCGACT GCGAGGAGCC GTTCCGGGCC
GCGCTCGAGG CCGACGTCCG CCTCGTGGCC GAGGAGCTCG TCGACTTCCG GCGGGAGCTC
TCGGCGCTCG TGGCGCGCTC GCCCAGCGGG CAGGCCGCGG CGTACCCCGT CGTCGCCTCC
ACCCAGGTCG ACGGCATCTG CCGCGAGGTG ATCGCGCCGG CGCCCGACCT CGACCCCGCG
CTCGCCGGCC GGGCGCAGGA GATCGCGCTG CACATCGCCG GCGCGCTCGA CGTGACCGGC
ATCCTCGCGG TCGAGCTGTT CGAAACCCGC GACGGCCGGG TCCTGGTCAA CGAGCTGGCG
ATGCGCCCGC ACAACACCGG GCACTGGACC CAGGACGGGG CGGTCACCTC CCAGTTCGAG
AACCACCTGC GCGCGGTGCT CGACCTGCCG CTCGGCTCGC CGACGCCCCG GGCCCGGTGG
ACGGTGATGG TGAACATCCT CGGCAGCGAC GACACGAGCG TCGGCAGGCT GTACGACGGC
TACCCGCACG CGCTCGCCCG GGACCCGATG CTGCGCGTGC ACCTCTACGG CAAGGAGCTG
CGGCCGGGCC GCAAGGTCGG GCACGTCAAC GCCTACGGCG AGGACCTCGA CGACTGCCTC
GAGCGGGCCC GGCACGCCGC GGCCTGGTTC CGCGGTGACC TGGGAGACGA GAGTGAGTAA
|
|---|
| Protein sequence | MPSPGESSPE RRLGQRMAPT LAVIGGGQLA RMMAAPANAL GLPLRLLAEG EGVSAAQVIP
DHVVGDYRDL ETLRKVTSGC PVVTFDHEHV PTGHLHALEE DGVAVRPGPH ALVHAQDKAV
MRERLGELGV PCPRNALVRT VEDVAAFGFP CVLKTSRGGY DGKGVWFVRS VGDCEEPFRA
ALEADVRLVA EELVDFRREL SALVARSPSG QAAAYPVVAS TQVDGICREV IAPAPDLDPA
LAGRAQEIAL HIAGALDVTG ILAVELFETR DGRVLVNELA MRPHNTGHWT QDGAVTSQFE
NHLRAVLDLP LGSPTPRARW TVMVNILGSD DTSVGRLYDG YPHALARDPM LRVHLYGKEL
RPGRKVGHVN AYGEDLDDCL ERARHAAAWF RGDLGDESE
|
|---|
| |