Gene Noca_3487 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_3487 
Symbol 
ID4595586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp3696842 
End bp3698122 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content74% 
IMG OID639778095 
Producthistidine kinase, dimerisation and phosphoacceptor region 
Protein accessionYP_924674 
Protein GI119717709 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCGCGAC CCGAGACGAC CGACCAGGCG GGAGGACCGA CCATCGCTGC CCGCACCGGT 
GCCGGCACCC GCTGGGCCCC CGACGTGCTC GCGGGCCTCG CGACCCTCCT GCTCGCACTG
GTCGAGGCCA ACCGGTTCAC CTACTACACG AGCGTCGAAG GTCTCGTCCT GGTCGCCTTC
GGCCTCGCGG TGGCTGTCGG TCTGTCCCGT GCCCTGCCGG GTGCCGCGCT GGCGATCGCC
TGGTTCGTGG GGTTCTCCCA GATCGTCACC GGGACCAACC CGCTGCTCAG CGAGGCGCTG
TTCGCCGTCG TCGCCTTCGG GTGCGCGCGC TGGGGCCGGC TGCCGACCCT GTGGCTGAGC
GGGCTCTCGA TCCCGGTGAG CGCGCTCGTC GTCGTGCTGT GGCTCTCACC GTCGGTCTTC
TACGAGGCGC TCCGACAGGC GGGGGTCGAG GGGCTCGCCG AGTCGGCGTA CCGCAACGGC
AGCGACAACT GGCGGGTGAC GGCCGCGGTC CTCGGGATGG CGGTGCTCGC CGCTCCGTGG
GCCCTCGGCC TGGCGATGCG CTTCGCCGCA CGGTCCCAGG CGTCGCGCCT CTCGCAGGTC
GCCGCGGAGG AGCAGCGCGA CCAGGCCGAG GAGATCGCCC GGCTGCGCGA GGACCAGGCC
CGGTTGGCCC GCGACGTGCA CGACGTCGTC GGCCACTCGC TGGCGGTGAT CCTCGCGCAG
GCCGAGTCCG CGCAGTTCCT CCGCGACGCC GACACCGGGA CGCTCCAGCG CACGATGGAC
AACATCGCGA CCACCGCGCG CGAGTCCCTC GACGACGTCC GCCAGGTGCT GTCCTCCACC
GGCGGGGACG CCGCGCCCCG GCCCGGCAGC ACCGACCTGG ACAGCCTGGT CGAGGGCGTC
CGGGCCAGCG GCAACGAGGT GCTGTCCACC GAGTTCGGCG TCCCGCAGCC GCTGCCGCCG
GAGCTGGCGG CCGTGGCGTT CCGCGTGCTG CAGGAGATGC TGACCAACGC GCTCAAGCAC
GGCCAGCGCG GGGAGCCGGT GCGGGTGGAG CGACACTGGG AGGGCGAGCT GAGGATCGAG
GTGCAGAACG TGGTGGAGCC CGGGGCGGAG GAGACCCAGC CACTCGTGGC GGCGGGTCCG
GGCGGTGGCC CGACCGGCGG TCAGGGGCTC GACGGCATGC GGCGCCGGCT CGAGTCGGTC
GGCGGCCGCC TCGACGTACG CCGGCGCACC GAGCCGCCCA CGTTCACCGC GACCGCGTGG
CTGCCGGTCC GCAGCCGATG A
 
Protein sequence
MARPETTDQA GGPTIAARTG AGTRWAPDVL AGLATLLLAL VEANRFTYYT SVEGLVLVAF 
GLAVAVGLSR ALPGAALAIA WFVGFSQIVT GTNPLLSEAL FAVVAFGCAR WGRLPTLWLS
GLSIPVSALV VVLWLSPSVF YEALRQAGVE GLAESAYRNG SDNWRVTAAV LGMAVLAAPW
ALGLAMRFAA RSQASRLSQV AAEEQRDQAE EIARLREDQA RLARDVHDVV GHSLAVILAQ
AESAQFLRDA DTGTLQRTMD NIATTARESL DDVRQVLSST GGDAAPRPGS TDLDSLVEGV
RASGNEVLST EFGVPQPLPP ELAAVAFRVL QEMLTNALKH GQRGEPVRVE RHWEGELRIE
VQNVVEPGAE ETQPLVAAGP GGGPTGGQGL DGMRRRLESV GGRLDVRRRT EPPTFTATAW
LPVRSR