| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3486 |
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| Symbol | |
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| ID | 4595585 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 3695895 |
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| End bp | 3696830 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 639778094 |
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| Product | D-alanine--D-alanine ligase |
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| Protein accession | YP_924673 |
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| Protein GI | 119717708 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGGACCC GGGTAGCGGT CGTCGGTGGC GGTCGCAGCT GCGAGCACGA CGTCTCGCTC
GCCTCCGCCG CGGCCGTGGC GGCCGGGCTC GACCCGCACC GGTACGACGT GGTCCGGCTG
ACCATCGGCC GGGACGGCGC TTGGCGCGAC GGCGATCGCC CGGTCGGCCT GGCAGCGGCC
GTCGAGGTGC TGCGCCGCTG TGATGTCGTG TTCCCGGTCG CGCACGGCCC GCACGGCGAG
GACGGCACCC TCGCCGCTCT CTGCGAGCTC GCCGGCGTCC CGTACGTCGG CTCCGGTGTC
CGCGCCGGGG CGCTCGCGAT GGACAAGTGG GCGACCAAGC TGGTCGCGGC GGCGCTCGGG
ATCGCCACCG CTGCCGGGCG TCTCGTGACC GCGGCGACGG CGACCCAGGA GACCTGGACG
GGCCCGGTCG TGGTGAAGCC GGTCGCGGCC GGCTCCAGCA TCGGCGTGGC GTTCGTGTCG
GAGCCCGCGT CGTTGCCGCC CGCACTGGCG ACCGCCCTCG CGCTCGACGA CCGGGCCCTG
GTCGAGGAGC TCGTGACCGG CCGGGAGATC GACGTCGCCG TGCTGCGCCG CGCCGACGGC
GCGGTGGTCG CGTCCCCGCC GCTCGAGATC GTCGCCGACG GGCTCTTCGA CTTCGACGCC
AAGTACGGCG GGCGCGCCGA CTTCCGGGTG CCGGCCGTGC TGGACGAGGT CGACGCGAAG
GCACTCGAGG GCGCCGCGGT GGCGACGTAC GACGCCCTGG GCTGCTCCGG TGTCGCCCGC
GTGGACTTCT TCCTCACCGA CACGGGCCCG GTGCTCAACG AGGTCAACAC GGTGCCGGGC
ATGACCGAGC ACTCCCAGGT GCCGCGGATG TTCGCCGCCG CCGGCCTGCC CTACCCCGAC
CTGCTCGACG AGCTGGTCTG CGGCGCCCAC CGGTGA
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| Protein sequence | MRTRVAVVGG GRSCEHDVSL ASAAAVAAGL DPHRYDVVRL TIGRDGAWRD GDRPVGLAAA
VEVLRRCDVV FPVAHGPHGE DGTLAALCEL AGVPYVGSGV RAGALAMDKW ATKLVAAALG
IATAAGRLVT AATATQETWT GPVVVKPVAA GSSIGVAFVS EPASLPPALA TALALDDRAL
VEELVTGREI DVAVLRRADG AVVASPPLEI VADGLFDFDA KYGGRADFRV PAVLDEVDAK
ALEGAAVATY DALGCSGVAR VDFFLTDTGP VLNEVNTVPG MTEHSQVPRM FAAAGLPYPD
LLDELVCGAH R
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