Gene Noca_3459 details

Gene Information

• Locus tag: Noca_3459
• ID: 4596240
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nocardioides sp. JS614
• Kingdom: Bacteria
• Replicon accession: NC_008699
• Strand: -
• Start bp: 3666763
• End bp: 3668754
• Gene Length: 1992 bp
• Protein Length: 663 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 639778065
• Product: radical SAM domain-containing protein
• Protein accession: YP_924646
• Protein GI: 119717681
• COG category: [C] Energy production and conversion
• COG ID: [COG1032] Fe-S oxidoreductase

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.525782
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCGCGC CCGTGAGCGC CCCGGAGTCC GTCTTCGCCC GCCTCGAGCC CCGACTCGCG 
TCGGTCTCCA AGCCGATCCA GTACGTCGGC GGCGAGCTCA ACTCGACCGT CAAGGACTGG 
GACTGCGCGC CCGAGGGCGA GACCGTCCGC TGGGCGCTGA TGTATCCCGA CGCGTACGAG 
GTCGGCCTGC CCAACCAGGG CACCCAGATC CTCTACGAGG TGCTCAACGA GCGCGACTGG 
ATCCTCGCGG AGCGCACCTA CGCGGTGTGG CCCGACATGG AGAAGGTCAT GCGCGCGGGC 
GACGCCGCCG GCCCGATCCC GCAGTTCACC GTCGACGCCC ACCGGCCGGT CCGCGCCTTC 
GACCTGTTCG GCTTCAGCTT CTCCACCGAG CTCGGCTACA CCAACATGCT CAACGCCGTC 
GACCTCGCCG GCATCCCGCT GCACGCCGCC GACCGCGACG CGGACGACCC GATCGTGCTC 
GCCGGCGGCC ATGCGGCGTT CAACCCCGAG CCGATCGCCG ACTTCATCGA CGCTGCCGTG 
CTCGGCGACG GCGAGGAGGT CGTGCTCGCG ATCTCCGAGG TGGTCCGCGA GTGGAAGCAG 
GAGAAGAACG GCCCCGGCGG CTCCGCCATG ACCAGGGACG AGTTGCTGCG CCGGCTCGCG 
GTCAGCGGCG GCGTCTACGT GCCGCGCTTC TACGACGTCG CGTACGCCGA GGACGGCACC 
ATCGAGGCGG TCGTGCCGAA CCGGCCCGGC ATCCCGTTCC GGATCCGCAA GCACACCCTG 
ATGGACCTCG ACGCGTGGCC CTACCCCGCA AAGCCGCTGG TCCCGCTCGC CGAGACCGTC 
CACGAGCGGT ACTCCGTGGA GATCTTCCGC GGCTGCACCC GTGGCTGCCG CTTCTGCCAG 
GCCGGGATGA TCACCCGCCC GGTGCGCGAG CGGTCGATCC GGACCATCGG CGACATGGTC 
GAGAACGGCA TCCGCAAGTC CGGGTTCGAG GAGGTCGGCC TGCTGTCGCT GAGCAGCGCC 
GACCACACCG AGATCGGGGA CGTCGCCAAG GGCCTGGCCG ACCGCTACGA GGGCACCAAC 
GTCAGCCTCA GCCTGCCGAG CACCCGCGTG GACGCCTTCA ACATCACGCT CGCCAACGAG 
TTCTCCCGCA ACGGGCGACG CTCGGGCCTC ACGTTCGCCC CCGAGGGCGG CTCGGAGCGG 
ATGCGCCGGG TGATCAACAA GATGGTCACC GAGGAGGACC TGATCCGCAC CGTGGCGGCG 
GCGTACTCCC ACGGCTGGCG GCAGGTGAAG CTCTACTTCA TGTGCGGGCT GCCGACCGAG 
ACCGACGAGG ACGTGCTGGC CATCGCCGAG CTCGCCAAGC AGGTGATCGC CAAGGGCCGC 
GAGGTCTCCG GGCGCAACGA CATCCGCTGC ACGGTCTCGA TCGGCGGCTT CGTGCCGAAG 
GCGCACACGC CGTTCCAGTG GGCCGGCCAG CTCGACGCCG AGACCACCGA CGAGCGGCTG 
AAGAAGCTGC GCGACGTGGT CCGCGAGGAC AAGCGGTTCG GTCGGGCGAT CGGCTTCCGC 
TACCACGACG GCAAGCCCGG CACGATCGAG GGCCTGCTCT CCCGGGGCGA CCGCCGCGTC 
GGCGCGATCA TCGAGCAGGT CTGGCGCGAC GGCGGCCGGT TCGACGGCTG GAGCGAGCAC 
TTCTCCTACG AGCGCTGGGT CGCCTCCGCC GAGGCGGGTC TGGCCGGCAC CGGCGTCGAC 
CTGGACTGGT ACACCACCCG CGAGCGCGAG TACGACGAGG TCCTGCCCTG GGACCACCTC 
GACTCCGGGC TCGACAAGGA CTGGCTGTGG GCCGACTGGG AGGACGCCCT CGCGGCCGCG 
GACGGCGCCG ACATCGAGGT CGAGGACTGC CGCTGGACGC CCTGCTACGA CTGCGGGGTG 
TGCCCGGAGA TGGGCACCGA GATCCAGATC GGCCCCACGG GCCAGAAGCT GCTGCCGCTG 
TCGGTGGTCT GA 

 

Protein sequence

MSAPVSAPES VFARLEPRLA SVSKPIQYVG GELNSTVKDW DCAPEGETVR WALMYPDAYE 
VGLPNQGTQI LYEVLNERDW ILAERTYAVW PDMEKVMRAG DAAGPIPQFT VDAHRPVRAF 
DLFGFSFSTE LGYTNMLNAV DLAGIPLHAA DRDADDPIVL AGGHAAFNPE PIADFIDAAV 
LGDGEEVVLA ISEVVREWKQ EKNGPGGSAM TRDELLRRLA VSGGVYVPRF YDVAYAEDGT 
IEAVVPNRPG IPFRIRKHTL MDLDAWPYPA KPLVPLAETV HERYSVEIFR GCTRGCRFCQ 
AGMITRPVRE RSIRTIGDMV ENGIRKSGFE EVGLLSLSSA DHTEIGDVAK GLADRYEGTN 
VSLSLPSTRV DAFNITLANE FSRNGRRSGL TFAPEGGSER MRRVINKMVT EEDLIRTVAA 
AYSHGWRQVK LYFMCGLPTE TDEDVLAIAE LAKQVIAKGR EVSGRNDIRC TVSIGGFVPK 
AHTPFQWAGQ LDAETTDERL KKLRDVVRED KRFGRAIGFR YHDGKPGTIE GLLSRGDRRV 
GAIIEQVWRD GGRFDGWSEH FSYERWVASA EAGLAGTGVD LDWYTTRERE YDEVLPWDHL 
DSGLDKDWLW ADWEDALAAA DGADIEVEDC RWTPCYDCGV CPEMGTEIQI GPTGQKLLPL 
SVV