| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3455 |
|---|
| Symbol | |
|---|
| ID | 4597271 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | + |
|---|
| Start bp | 3664434 |
|---|
| End bp | 3665543 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639778061 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_924642 |
|---|
| Protein GI | 119717677 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2807] Cyanate permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0839059 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTCGCGG AGGTCCGGGA CGCGTACTCG ATGTCGGGGG CGACCGCCGG GCTCCTCACG
TCGCTGCCGG TGATCGCGTT CGCCGCGTTC GGCGCGCTCG CGCCCGCTGC CGCGCACCGG
ATCGGCATCC ACCGGGTCAC GCTGCTGGCG ATCGTGGCCG CGATCGCCGG CCTCATCGGT
CGGGTGCTGA CCCACCGGGA GTCGGTGTTC CTGGTGCTCT CGCTCGTCGC CCTCGCGGGG
ATGGCGATGG CGAACGTGCT GCTCCCCTCG CTGGTGAAGC TGCACTTCCC CGACCGGATC
GGCCGGGTCA CCGCGATCTA CACGACCGCG CTGTCCGTCG GCCTGACGGC GTCGCTGGTG
CTGACCGTCC CGATCGCCGA CGCGTTCGGC GGCTGGCGCT CCGGGCTGGG GGCCTGGGCC
GTCCTCGCGG TGCTCGCCGC GGTGCCCTGG CTCTCCCTGA TCGCCCACGA TCGCCACCTC
GAGAGTGCCC CGCGCTCGAT CCGGTACGTC GACGTCGCTC GCACGCCGCT GGGCGTGGCG
ATGTCGTTGT TCTTCGGGCT GCAGTCGTTG CAGGCGTACG TGGTCTTCGG CTGGTTCCCG
CAGCTGTGGC GCGACAGCGG CTACTCCGCG ACCGTCGCCG GCGTGCTCGC AGGAGTCGTC
GCCGGCATGA GCATCCCGCT GGCGCTGTGG CTGCCGAACG TGCTGGCCCG GAGTGAGGAC
CCGCGGCGGC TGATGTTCAC GGTGATCGCG GCCTACCCCG TCGGCTACAT CGGCCTGATG
GTGGCGCCGT ACGCCTTGGC GCCGGTGTGG GCCGTCGTCG TCGGTGTCGC CGCGGTGACC
TTCCCCCTGA TCCTGACCCT GATCGGCCTG CGAGCGCGCA CCCCGCAGGG CACGGCGGCG
CTGTCGGCGT TCACCCAGTC GACCGGCTAC CTGGTTGCCG CGGTCGGCCC GTTCCTGATC
GGCGTCGTGC ACGACGCGTC CGGCGGCTGG AACCTGCCGC TGCTGATCCT GCTGCTGCTC
GCCCTGCCGC TGTTCGCGCT CGCCGCGTAC GTCGCGCGGC CGATGTACGT CGAGGACCAG
CTCAAGCGCT CGGGCTCGCC GCGCACCTGA
|
|---|
| Protein sequence | MLAEVRDAYS MSGATAGLLT SLPVIAFAAF GALAPAAAHR IGIHRVTLLA IVAAIAGLIG
RVLTHRESVF LVLSLVALAG MAMANVLLPS LVKLHFPDRI GRVTAIYTTA LSVGLTASLV
LTVPIADAFG GWRSGLGAWA VLAVLAAVPW LSLIAHDRHL ESAPRSIRYV DVARTPLGVA
MSLFFGLQSL QAYVVFGWFP QLWRDSGYSA TVAGVLAGVV AGMSIPLALW LPNVLARSED
PRRLMFTVIA AYPVGYIGLM VAPYALAPVW AVVVGVAAVT FPLILTLIGL RARTPQGTAA
LSAFTQSTGY LVAAVGPFLI GVVHDASGGW NLPLLILLLL ALPLFALAAY VARPMYVEDQ
LKRSGSPRT
|
|---|
| |