Gene Noca_3416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_3416 
Symbol 
ID4598214 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand+ 
Start bp3618101 
End bp3618709 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content67% 
IMG OID639778022 
Productberberine/berberine domain-containing protein 
Protein accessionYP_924603 
Protein GI119717638 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.510666 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGCCGA TGATCTGGGC AGGTGACCCT GTCGAGGGTG AGCGCCAGAT CGGCGCCAAG 
ATGGACCTGC TCGGCGATCT GGTGACGGTG GCCACGGGCG GAGTGATGCC GTACGTCGTG 
CTGCAGAGCC TCTTCGACGA GGTCTTCGCC CACGGTCGTC GGCACTACGC GAAGGCCGGC 
TTCCTGGTGG AGCTGCCGGA CGAGGTCCTG GACACGATGA TCGAGGCGAT GCATCGGCTC 
CCCCACCACG CCTCGCAGAT CGAACTGATG CGACTCGGTG GAGCGGTCGC ACGCGTTCCC 
GAGGACGCGA CCGCCTTCCC GCATCGCAAG GCCGACTGGC CGTTCAACCT GATCGGCCTG 
TGGGACGAGG CCGACCAGGA CCCGGAGGTT CGGCAGTGGG TGCGCGATCT GTACGACCGC 
CTCGAACCGT TCGCGACCGG CGGCACCTAC GTGAACTACG CGGGTGGCGA GGAGACCGGC 
GGTGCGAGGT CGGCCTACGG CGACGGCGTC GGCGGCCGCA CCTGGGACCG CCTGGTCGAG 
CTGAAGCAGA AGTACGACCC CGAGAACCTG TTCCGCTTCA ACGCTAATCT GGCCCTGACC 
ACGGCGTGA
 
Protein sequence
MMPMIWAGDP VEGERQIGAK MDLLGDLVTV ATGGVMPYVV LQSLFDEVFA HGRRHYAKAG 
FLVELPDEVL DTMIEAMHRL PHHASQIELM RLGGAVARVP EDATAFPHRK ADWPFNLIGL 
WDEADQDPEV RQWVRDLYDR LEPFATGGTY VNYAGGEETG GARSAYGDGV GGRTWDRLVE 
LKQKYDPENL FRFNANLALT TA