| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3405 |
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| Symbol | |
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| ID | 4598203 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 3607405 |
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| End bp | 3608520 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 639778011 |
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| Product | glycine oxidase ThiO |
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| Protein accession | YP_924592 |
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| Protein GI | 119717627 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | [TIGR02352] glycine oxidase ThiO |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.289575 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGGTGG CGGTGATCGG GGCCGGCATC GTCGGTCTGG CCTGCGCGGA GGAACTGGTC
CGCGCGAAGC ACGACGTGCG GGTGTTCGAC CCCGACCCGG CTGGTGGCGC GACCCGGGCG
GCGGCCGGGA TGCTCGCACC GGCCGGTGAG GCCTGGCACG GCGAGACGGA CCTGCTGCGG
CTCGGCGTGG CCTCTGCGCG ACTGTGGCCG GCGTACGCGG CTCGACTGCG GGCCGTCTCC
GGCGTGGACG TCGACCTGCG CACCGAGGGC ACGTTGCTGA TCGGCCAGGA CCATGACGAC
CTTCAGCAGG TGCGGCGCAC GCTCGAGGTG CTCTCGACCG AGGGGATCGC CTTCCGGGAG
CTCGACCGGC GCGAGGCACG GTCGGACGAG CCCACCTTGT CTCGGGTCGC AGGCGCGGTG
CTCGTCCCCG AGGACCACAA CGTCAACCCG CGGCTGGTCG CTGAGGCCCT GCTACGCCTG
CTGGGTGAAC GGGTGGTCCG GGCCCGGGCG TCGGCGATCG ACGGTGGAGT CCGCTTCGCG
GACGGGATCG AGTTCCCGTG CGACGCGGTG GTCATCGCGA CCGGTGCCGA GGCCCGGAGC
CTGGTGCCGC AGGTCCGGCC GGTCCGCGGG GAGACGATCC GGCTGCGGGT GATCGACCGG
CCGTCCCGGG TGCTGCGCGC GCGGGTGCAC GGCGAGGCGG TGTACGTCGT GCCGCGGGCG
GGCGGCGAGG TCGTCGTGGG TGCCACTGAG GAGGAGCATG CCTCGGAACC GGTGGCGACG
CTCGGCGCGG TGGTGCGACT GCTGCACGCC GCGCGCACCC TGGTGCCCGG GCTGGAGAGC
TCCGACGTCG TCGAGATCAC CGCCCGGCAT CGCCCCGGCA CCCCCGACAA CGGACCACTG
CTCGGGGTCA CCGACGGGCC AGGAGCGGTC CGGCAGGTGC TGGCCGTCGG GCACTACCGC
GGCGGCGTGC TGCTCGCGCC GCTGACCGCC CAGGTGATCC GGGCTCACGT CGAGAACGGC
GACGTCCCCG CTGTCGCGCG TCCGTTCGCG CCGAGCCGCT TCGGCCCGCA CCGGACCGAT
TCCCCCACCG ACCACTGGAA GGACCCCATC TCATGA
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| Protein sequence | MRVAVIGAGI VGLACAEELV RAKHDVRVFD PDPAGGATRA AAGMLAPAGE AWHGETDLLR
LGVASARLWP AYAARLRAVS GVDVDLRTEG TLLIGQDHDD LQQVRRTLEV LSTEGIAFRE
LDRREARSDE PTLSRVAGAV LVPEDHNVNP RLVAEALLRL LGERVVRARA SAIDGGVRFA
DGIEFPCDAV VIATGAEARS LVPQVRPVRG ETIRLRVIDR PSRVLRARVH GEAVYVVPRA
GGEVVVGATE EEHASEPVAT LGAVVRLLHA ARTLVPGLES SDVVEITARH RPGTPDNGPL
LGVTDGPGAV RQVLAVGHYR GGVLLAPLTA QVIRAHVENG DVPAVARPFA PSRFGPHRTD
SPTDHWKDPI S
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