Gene Noca_3404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_3404 
Symbol 
ID4598202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp3607220 
End bp3607408 
Gene Length189 bp 
Protein Length62 aa 
Translation table11 
GC content70% 
IMG OID639778010 
Productthiamine biosynthesis protein ThiS 
Protein accessionYP_924591 
Protein GI119717626 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2104] Sulfur transfer protein involved in thiamine biosynthesis 
TIGRFAM ID[TIGR01683] thiamine biosynthesis protein ThiS 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.376587 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGATCA AGCTCAACGG CCAGCCGCAC GTCGTGGAGG AGGGCGCGAC CCTGCAGGAC 
CTGCTTCCGT CGGCCCGCGG ATGCGCGGCA GCGCTCAACG GGGCCATCGT GCCCGCAGCA
TCGTGGGAGT CGACCCGGTT GTCGGAGAAG GATGCGGTCG AGGTCGTCAC CGCGCACCAG
GGCGGGTGA
 
Protein sequence
MRIKLNGQPH VVEEGATLQD LLPSARGCAA ALNGAIVPAA SWESTRLSEK DAVEVVTAHQ 
GG