| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3400 |
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| Symbol | |
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| ID | 4598198 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 3603372 |
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| End bp | 3605057 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639778006 |
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| Product | thiamine biosynthesis protein ThiC |
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| Protein accession | YP_924587 |
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| Protein GI | 119717622 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
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| TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.557374 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGATCC ACCCGAGCCA CAGCACCGTC CACCGCACCG GATCGCGCGC CGACATCCGC
GTGCCCTTCA CCCGGGTCGC GCTCACCAAC GGCGAGACGT TCGACCGGTA CGCCACTGCG
GGACCCGGCA GCGACCCCGA GGTCGGGCTG CCGCCCCTGC GCGCTGACTG GATCGCCCAG
CGCGGCGACA CCGAGGAGTA CGCCGGCCGG GAGACCCAGC TGCTCGACAA CGGCAGGGCC
GCCATCCGAC GGGGCGAGGC ACGCGACCAG TGGCGAGGGA CCAGAAGCCG GCCGCGGCGC
GGTACCAGCA CCGTCACCCA GATGCACTAC GCCCGGCAGG GCGTGGTGAC CCCGGAGATG
GAGTACGTCG CGATCCGCGA GGGCTGCAAC GTCGACCTGG TCCGCTCCGA GGTCGCCGCC
GGGCGCGCGA TCATCCCCGC CAACCTCAAC CACCCCGAGG CCGAGCCGAT GATCATCGGG
CGCCGGTTCC TGGTCAAGGT GAACGCCAAC ATCGGCAATT CCGCGGTCAC CAGCTCGATC
GCCGAGGAGG TCGACAAGCT CACCTGGGCG GTCACCTGGG GTGCCGACAC CGTCATGGAC
CTGTCCACCG GCGACGACAT CCACACCACC CGGGAATGGA TCATCCGCAA CTCACCGGTC
CCGATCGGGA CCGTCCCGAT CTACCAGGCC CTGGAGAAGG TCGACGGCGA CGCCAGCCGG
CTGACCTGGG AGATCTTCCG AGACACCGTC ATCGAGCAGT GCGAACAGGG CGTGGACTAC
ATGACCATCC ATGCCGGGGT GCTGCTGCGC TACGTGCCAC TGACCGCGCA GCGCATCACC
GGGATCGTCT CCCGCGGCGG GTCGATCATG GCCGGCTGGT GCCTGGCGCA CCACCAGGAG
AACTTCCTCT ACACGCACTT CGACGAGCTG TGCGAGATCT TCGCACGCTA CGACGTGTCC
TTCTCGCTCG GCGACGGCCT GCGCCCCGGT TGCACAGCCG ATGCGAACGA CGAGGCGCAG
CTCTCCGAGC TGCGTACCCT GGCCGAGCTC ACCCAGCGTG CCTGGGAGCA CGACGTCCAG
GTGATGGTGG AAGGACCTGG GCACGTGCCG CTCAACCTGG TCGAGGAGAA CGTCGTCCTG
CAGCAGGACT GGTGCCACGG CGCCCCGTTC TACACCCTCG GCCCGCTGGC CACCGACATC
GCACCCGGCT ACGACCACAT CACCTCCGCG ATCGGCGCGG CGGCCATCGC CATGCACGGC
ACCGCCATGC TCTGCTACGT CACCCCCAAG GAGCACCTCG GACTGCCGAA CCGCGACGAC
GTCAAGACCG GCGTGATCAC CTACAAGCTC TCCGCGCACG CCGCCGACGT CGCCAAGGGC
CACCCCGGAG CCCGCGACTG GGACGACGCC TTGTCCAAGG CCCGCTTCGA GTTCCGCTGG
CACGACCAGT TCGCCCTCTC CCTCGACCCG CACACCGCCG AGTCCTTCCA CGACGAGACG
CTCCCGGCCG AGGCCAGCAA GACGGCGCAC TTCTGCTCCA TGTGCGGCCC GAAGTTCTGC
TCGATGCGCA TCAGCCAGGA CGTACGCGAC TACGTCACCT CAGGCATGGC CGAGAAGTCG
GCGCAGTTCC TGGAGCTGGG CTCCTCGGTC TACGTCGAGG GTGATACCTA CACCGCGGCA
CCGTGA
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| Protein sequence | MQIHPSHSTV HRTGSRADIR VPFTRVALTN GETFDRYATA GPGSDPEVGL PPLRADWIAQ
RGDTEEYAGR ETQLLDNGRA AIRRGEARDQ WRGTRSRPRR GTSTVTQMHY ARQGVVTPEM
EYVAIREGCN VDLVRSEVAA GRAIIPANLN HPEAEPMIIG RRFLVKVNAN IGNSAVTSSI
AEEVDKLTWA VTWGADTVMD LSTGDDIHTT REWIIRNSPV PIGTVPIYQA LEKVDGDASR
LTWEIFRDTV IEQCEQGVDY MTIHAGVLLR YVPLTAQRIT GIVSRGGSIM AGWCLAHHQE
NFLYTHFDEL CEIFARYDVS FSLGDGLRPG CTADANDEAQ LSELRTLAEL TQRAWEHDVQ
VMVEGPGHVP LNLVEENVVL QQDWCHGAPF YTLGPLATDI APGYDHITSA IGAAAIAMHG
TAMLCYVTPK EHLGLPNRDD VKTGVITYKL SAHAADVAKG HPGARDWDDA LSKARFEFRW
HDQFALSLDP HTAESFHDET LPAEASKTAH FCSMCGPKFC SMRISQDVRD YVTSGMAEKS
AQFLELGSSV YVEGDTYTAA P
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