Gene Noca_3398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_3398 
Symbol 
ID4598196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp3601340 
End bp3602224 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content74% 
IMG OID639778005 
Productaldose 1-epimerase 
Protein accessionYP_924586 
Protein GI119717621 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2017] Galactose mutarotase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.226465 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGTGATC CGGCCGGCCA GAACCTGGTC CTCTCCCATG GTCCGTACCG GGCCGAGGTC 
GTCACCGTCG GCGCCGGTCT CCGGTCGCTC TCGTACGACG GGCGTCCGCT GGTGGCCGGC
TATCCCGCCG GCGAGATGTG CCCAGACTAC CGCGGCTGGG TGCTGATGCC CTGGCCGAAC
CGGGTCGGCG ACGGCGCGTA CGAGTTCGCC GGCCGGCGCC TACAGCTGCC GCTGACCGAG
CCCGAGCGCG GCAACGCCCT GCACGGCTTC GCGGGCTGGG CGGAGTGGAC GCTCGCCAAC
CACGACGACA ACCACGCCGC GCTGCGGCTC GCCCTGGTCC CGCGGACCGG GTACCCCTTC
CCGCTCGACC TGGCGGTCGA CTACGACCTC ACCGACGCCG GGCTGCGGGT CACCCTCGCG
GCCACCAACG CCGGCGGCAC GGTCGCGCCG TACGGCACCG GGCACCACCC GTACTTCACC
TTCGACCGGC CGGTCGACGA GCTCACCCTG CGGATCCCGG CGACCACGTG GTGCCCGATG
GACGAGCGCG GCCTCGCCGG CCCGGCGCGG CCGGTGGCCG GCACGGCCTA CGACTTCCGC
GACGGCCGGC TCGTCGGCGA CGCCGTGATC GACCACCCGT TCGGCGGTCT GACCGACCGG
GTCGTCACGA TCGCCGACCC GGACGGACAC GCCGTGACGC TCACCCTCGA CGACGGCTTC
GACTGGGTGC ACGTGTTCAC CTCCGACACC CACGACCCGC CGCGCCGCTC GCTGGCCGTC
GAGCCGACCA CCTGCCCGCC GGACGCGTTC CGCACCGGCG TCGACCTGGT CGTGCTCGAG
CCCGGCGAGA CCCATCGGGC CTCGTTCACC ATCACTGGAA GCTGA
 
Protein sequence
MRDPAGQNLV LSHGPYRAEV VTVGAGLRSL SYDGRPLVAG YPAGEMCPDY RGWVLMPWPN 
RVGDGAYEFA GRRLQLPLTE PERGNALHGF AGWAEWTLAN HDDNHAALRL ALVPRTGYPF
PLDLAVDYDL TDAGLRVTLA ATNAGGTVAP YGTGHHPYFT FDRPVDELTL RIPATTWCPM
DERGLAGPAR PVAGTAYDFR DGRLVGDAVI DHPFGGLTDR VVTIADPDGH AVTLTLDDGF
DWVHVFTSDT HDPPRRSLAV EPTTCPPDAF RTGVDLVVLE PGETHRASFT ITGS