Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_3398 |
Symbol | |
ID | 4598196 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 3601340 |
End bp | 3602224 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 639778005 |
Product | aldose 1-epimerase |
Protein accession | YP_924586 |
Protein GI | 119717621 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2017] Galactose mutarotase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.226465 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCGTGATC CGGCCGGCCA GAACCTGGTC CTCTCCCATG GTCCGTACCG GGCCGAGGTC GTCACCGTCG GCGCCGGTCT CCGGTCGCTC TCGTACGACG GGCGTCCGCT GGTGGCCGGC TATCCCGCCG GCGAGATGTG CCCAGACTAC CGCGGCTGGG TGCTGATGCC CTGGCCGAAC CGGGTCGGCG ACGGCGCGTA CGAGTTCGCC GGCCGGCGCC TACAGCTGCC GCTGACCGAG CCCGAGCGCG GCAACGCCCT GCACGGCTTC GCGGGCTGGG CGGAGTGGAC GCTCGCCAAC CACGACGACA ACCACGCCGC GCTGCGGCTC GCCCTGGTCC CGCGGACCGG GTACCCCTTC CCGCTCGACC TGGCGGTCGA CTACGACCTC ACCGACGCCG GGCTGCGGGT CACCCTCGCG GCCACCAACG CCGGCGGCAC GGTCGCGCCG TACGGCACCG GGCACCACCC GTACTTCACC TTCGACCGGC CGGTCGACGA GCTCACCCTG CGGATCCCGG CGACCACGTG GTGCCCGATG GACGAGCGCG GCCTCGCCGG CCCGGCGCGG CCGGTGGCCG GCACGGCCTA CGACTTCCGC GACGGCCGGC TCGTCGGCGA CGCCGTGATC GACCACCCGT TCGGCGGTCT GACCGACCGG GTCGTCACGA TCGCCGACCC GGACGGACAC GCCGTGACGC TCACCCTCGA CGACGGCTTC GACTGGGTGC ACGTGTTCAC CTCCGACACC CACGACCCGC CGCGCCGCTC GCTGGCCGTC GAGCCGACCA CCTGCCCGCC GGACGCGTTC CGCACCGGCG TCGACCTGGT CGTGCTCGAG CCCGGCGAGA CCCATCGGGC CTCGTTCACC ATCACTGGAA GCTGA
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Protein sequence | MRDPAGQNLV LSHGPYRAEV VTVGAGLRSL SYDGRPLVAG YPAGEMCPDY RGWVLMPWPN RVGDGAYEFA GRRLQLPLTE PERGNALHGF AGWAEWTLAN HDDNHAALRL ALVPRTGYPF PLDLAVDYDL TDAGLRVTLA ATNAGGTVAP YGTGHHPYFT FDRPVDELTL RIPATTWCPM DERGLAGPAR PVAGTAYDFR DGRLVGDAVI DHPFGGLTDR VVTIADPDGH AVTLTLDDGF DWVHVFTSDT HDPPRRSLAV EPTTCPPDAF RTGVDLVVLE PGETHRASFT ITGS
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