Gene Noca_3388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_3388 
Symbol 
ID4598186 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp3591793 
End bp3592677 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content73% 
IMG OID639777995 
Productiron permease FTR1 
Protein accessionYP_924576 
Protein GI119717611 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0672] High-affinity Fe2+/Pb2+ permease 
TIGRFAM ID[TIGR00145] FTR1 family protein 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTCGCGA ACTACCTGAT CGGTCTCCGT GAGGGCCTCG AGGCGGCGCT GGTCGTCAGC 
ATCCTGGTCG CCTACCTGGT CAAGTCCGAG CGGCGTGGGC TGCTGCCCCG GATCTGGGCG
GGCGTCGCGC TCGCCGTCGG GGTCTCGCTG GCCTTCGGCT TCGCCCTGTT CTACGGCCCG
CGCGGCCTGA CCTTCGAGGC CCAGGAGGCG ATCGGCGGCA CCCTGTCGAT CGTCGCCGTC
GGCCTGGTCA CCTGGATGAT CTTCTGGATG GCCCGCGCCG CGCGCACGTT GAGCGGCGAG
CTGCGCGGCC AGATCGACAA GGCCGCCGAG GGCGGCTGGA TCGCGCTGGT CCTGGTGGCC
GTCCTCGCGG TCGGCCGCGA GGGCCTCGAG ACCGCACTGT TCCTCTGGTC GGCGACCGAG
GCCGTGACCC GCGAGAGCGG CGCCACCTGG CAGCCGCTGC TCGGCGCCGG ACTCGGCATC
GCGACCGCCG TCGCGCTCGG CTACCTGCTC TTCCGCGGCG CGATCTCGAT CAACCTGAGC
CGGTTCTTCG CCTGGACGGG CGGCTTCCTG ATCGTGGTCG CCGCCGGCGT CCTGTCCTAC
GGCGTCCACG ACCTGCAGGA GGCCGGCCTC CTCCCCGGCC TGCACACCAT CGCCTGGGAC
GTGTCCGGCG CGATCGACCC GTCGACCTGG TACGCCGCAC TCCTCAAGGG CGTCGTCAAC
TTCTCCCCGG TCACCACCGT GCTCGAGGCC GTCGTCTGGA CGCTGTACGT CGTCCCCACG
ATGGCGTTGT TCGTGCGTGG CGTCCGTGGC CGCAACGTCG CGGCCCCCAC TGCTGCTCCC
GCCCCGGCGA CGGACCCGGC ACCCGCCGCG CCCGCCAGCC GCTGA
 
Protein sequence
MFANYLIGLR EGLEAALVVS ILVAYLVKSE RRGLLPRIWA GVALAVGVSL AFGFALFYGP 
RGLTFEAQEA IGGTLSIVAV GLVTWMIFWM ARAARTLSGE LRGQIDKAAE GGWIALVLVA
VLAVGREGLE TALFLWSATE AVTRESGATW QPLLGAGLGI ATAVALGYLL FRGAISINLS
RFFAWTGGFL IVVAAGVLSY GVHDLQEAGL LPGLHTIAWD VSGAIDPSTW YAALLKGVVN
FSPVTTVLEA VVWTLYVVPT MALFVRGVRG RNVAAPTAAP APATDPAPAA PASR