| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3385 |
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| Symbol | |
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| ID | 4598183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 3588017 |
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| End bp | 3589627 |
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| Gene Length | 1611 bp |
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| Protein Length | 536 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639777992 |
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| Product | D-3-phosphoglycerate dehydrogenase |
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| Protein accession | YP_924573 |
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| Protein GI | 119717608 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases
[COG1760] L-serine deaminase |
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| TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.367289 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCATGC CCGCCGCCAC GCCCGCCGAC CGGCCCGTCG TACTCATCGC CGAGGAGCTC
AGTCCGGCGA CCGTCGAGGC ACTCGGACCG GACTTCGAGA TCCGGTACTG CGACGGCGCG
GATCGCGGCG AGCTGCTGGC CGCGCTCCCC GAGGCGGACG CGATCCTGGT GCGGTCCGCG
ACCAAGGTCG ACGCCGAGGC GCTCGCCGCG GCCCGCCGGC TCAAGGTCAT CGCCCGGGCC
GGTGTGGGCC TGGACAACGT CGACGTGCGC GCGGCGACCC AGGCGGGCGT GATGGTCGTC
AACGCCCCGA CCTCCAACAT CGTCTCCGCC GCCGAGCTCG CGGTCGCGCT GATGCTCGCC
GCCGCCCGGC ACATCTCGCC GGCCCACGCC GCGCTGAAGA ACGGCGAGTG GAAGCGGGCC
CGCTACACCG GCACCGAGCT CTACGAGAAG ACCGTCGGCA TCGTCGGCCT GGGTCGGATC
GGCGTCCTGG TCGCGCAGCG GCTGAGCGCC TTCGGCATGA AGATCGTGGC GTACGACCCG
TACGTGCAGG CTGGCCGGGC CGCGCAGATG GGCGTGCGGC TGGTCGACCT CGACACGCTG
CTGGCCGAGG CCGACTTCAT GTCCGTGCAC CTGCCCAAGA CCCCCGAGAC CGTCGGCCTG
ATCGGCGCCG ACCAGCTCGC GAAGGTCAAG CCCTCGCTGG TGCTGGTCAA CGCCGCGCGC
GGCGGCATCG TCGAGGAGGC CGCCCTCTAT GCCGCCCTCA AGGAGGGCCG GGTCGCGGCG
GCCGGGCTCG ACGTGTTCGC GCAGGAGCCG TGCACCGACA GCCCGCTGTT CGAGCTCGAG
AACGTCGTCG CCACGCCGCA CCTCGGCGCC TCCACCGACG AGGCGCAGGA GAAGGCCGGC
ATCGCGGTCG CGAAGTCGGT GCGGCTCGCG CTGTCCGGCG AGCTGGTCCC CGACGCGGTC
AACGTGCAGG GCGGTGTGAT CGCCGAGGAC GTGCGCCCTG GCATCCCGCT CACCGAGAAG
CTCGGCCGGG TGTTCACCGC CGTGGCCGGC GAGGTCGCGC TGTCGATCGA CGTCGAGGTG
CGCGGCGAGA TCACCGACTA CGACGTCAAG GTGCTCGAGC TGGCGGCCCT CAAGGGGATC
TTCACCGACA TCGTCGAGGA CCAGGTCTCC TACGTGAACG CGCCGCTGCT CGCCGCCGAG
CGCGGCACCG CCGTACGCCT GGTCGCCGAC CCGGAGAGCC CCGACCACCG CAACCTGATC
ACGATCCGCG GCACCCTCGC CGACGGCGAG CAGGTCTCGG TCAGCGGCAC CCTGATCGGG
ATCAACCAGA AGGAGCGGCT GGTCGAGGTC AACGGCTTCG ACGTCGACCT CGAGCCCACC
GAGCACCTCG CGTTCCTCAC CTACGAGGAC CGGCCCGGCA TGGTCGGCAC CGTCGGCGTG
ATCATCGGGG ACGCCGGCAT CAACATCGCC GGCATGCAGG TCGCCCGCGA CGCCAAGGGC
GGCCGGGCCC TGGTCGCGCT GTCGGTCGAC ACCGCCATCC CCGCCGAGGT GCTCGCCGAG
ATGCAGCACG CGATCGATGC GATCTCGGTG CGCGCGGTCG ACCTGGTCTG A
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| Protein sequence | MTMPAATPAD RPVVLIAEEL SPATVEALGP DFEIRYCDGA DRGELLAALP EADAILVRSA
TKVDAEALAA ARRLKVIARA GVGLDNVDVR AATQAGVMVV NAPTSNIVSA AELAVALMLA
AARHISPAHA ALKNGEWKRA RYTGTELYEK TVGIVGLGRI GVLVAQRLSA FGMKIVAYDP
YVQAGRAAQM GVRLVDLDTL LAEADFMSVH LPKTPETVGL IGADQLAKVK PSLVLVNAAR
GGIVEEAALY AALKEGRVAA AGLDVFAQEP CTDSPLFELE NVVATPHLGA STDEAQEKAG
IAVAKSVRLA LSGELVPDAV NVQGGVIAED VRPGIPLTEK LGRVFTAVAG EVALSIDVEV
RGEITDYDVK VLELAALKGI FTDIVEDQVS YVNAPLLAAE RGTAVRLVAD PESPDHRNLI
TIRGTLADGE QVSVSGTLIG INQKERLVEV NGFDVDLEPT EHLAFLTYED RPGMVGTVGV
IIGDAGINIA GMQVARDAKG GRALVALSVD TAIPAEVLAE MQHAIDAISV RAVDLV
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