| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3381 |
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| Symbol | |
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| ID | 4598179 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 3583356 |
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| End bp | 3584129 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639777988 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_924569 |
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| Protein GI | 119717604 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.804468 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGGCT CCCAGCATCC GCTCGCCGGC CGGGTCGCCC TCGTGACCGG GGCGGGCCAG
GGCATCGGGC GGGCTGTCGC CGAGCGGCTT TCCCGCGACG GCGCCACCGT CGCCGTCAAC
GACATCGCCC ACGACGCGCG GATGGACGCG GTGGTCGCCG CGACCGGCGG CGTCGCCGCC
CCCGCCGACG TGTCGGACCG CGAAGCGGTC TTCGCGCGGG TCGACGACCT CACGCGGAAC
GTCGGCCCCG TCGACGTGCT CGTCCTCAAC CATGCCTACA TGACCATGGG CGCCCTCGTC
GACCACGACC TCGAGGACTG GTGGCGGGTC GTCGACACCA ACCTCGGGGG TGCCTTCCAC
CTGATCCAGG CCGTGCTGCC CGGCATGCTG CGCGCCCGGT TCGGACGGAT CGTCATCGTG
TCCTCGGAGT GGGGGGTGAT CGGCTGGCCG CAGGCGACGG CGTACGCCGC GTCCAAGGCC
GGGCTGATCT CCCTGACCAA GACCCTCGGA CGAGAACTCG CGCCGCAGGG GGTCATCGTC
AACGCGGTGG CCCCGGGCGT CATCGACACC CCCCAGCTCG AGGTCGACGC CCGGGCCGCG
GGCGTCACCC GCGACCACAT CGTCGCGGAG TACGCCCAGG GCATCCCGAT GCGCCGCGTC
GGGCAACCCG ACGAGATCGC GGCCACCGTG GCGCTGCTCG CCGACCCACG GATCTCCGCC
TTCGTGGGAC AGGTCCTGCA GGTCAACGGC GGGTCGACCC GCTCCCGGGC CTGA
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| Protein sequence | MAGSQHPLAG RVALVTGAGQ GIGRAVAERL SRDGATVAVN DIAHDARMDA VVAATGGVAA
PADVSDREAV FARVDDLTRN VGPVDVLVLN HAYMTMGALV DHDLEDWWRV VDTNLGGAFH
LIQAVLPGML RARFGRIVIV SSEWGVIGWP QATAYAASKA GLISLTKTLG RELAPQGVIV
NAVAPGVIDT PQLEVDARAA GVTRDHIVAE YAQGIPMRRV GQPDEIAATV ALLADPRISA
FVGQVLQVNG GSTRSRA
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