| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3380 |
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| Symbol | |
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| ID | 4598178 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 3582634 |
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| End bp | 3583356 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 639777987 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_924568 |
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| Protein GI | 119717603 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.565098 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCGGGG GCGGAGCCTC CGGGACCGAC TCGCGGCCAC GGGTCGCGAT CGTCACCGGC
GCCGCGAGCG GCATCGGAGC CGCCGTCGCA GCCGAGCTGA CCGACCGCGA CTGGCAGGTG
GCCGGGTTCG ACCTGCGTCC GTCGGGGTGG GACGTCAGCC AGGTCGTCGA CGTCGCGGAC
GCGGGAGCGG TGCGGGACGC GGTCGCCCGC GTCGAGCTCG AGCTGGGGCC GGTGGAGGCC
GTGGTCTCCG CGGCCGGCCA CTACGCGATG GTCGACTTCG GCGACATCAC CCCGACGGAG
TGGAGGACCA TGCTGCGCGT CCATCTCGGT GGCCTCGTGC ACCTCGCCCG TGCGGTGCTG
CCGCGGATGA CCGAGCAGCG GCGGGGCAGC ATCGTCGCCG TGACCTCCGA GCTGGCCATC
GGCGGCGGGG ATCGCGATGC CCACTACGCC GCAGCCAAGG GGGCGATCGT CGGGCTGGTC
CGCAGCCTCG CCGCCGAGGT CGCCGCCACC GGCGTGCGGG TCAACGCCGT CGCGCCCGGG
CCCACAGACA CGCCCCTGAT CGGGCCCGAC TCCCCGTGGC GCGACCCGGA CTACCTGGCC
AGGATCCCGC TTCGACGGCT CGTCGCGCCC GGCGAGGTCG CTCGTACCGT GGCGTACCTG
GTCGAGGAGG CCACGTTCAT GACCGGTGAG ATCCTGTCAC CGAACGCCGG GGCGGTGATC
TGA
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| Protein sequence | MSGGGASGTD SRPRVAIVTG AASGIGAAVA AELTDRDWQV AGFDLRPSGW DVSQVVDVAD
AGAVRDAVAR VELELGPVEA VVSAAGHYAM VDFGDITPTE WRTMLRVHLG GLVHLARAVL
PRMTEQRRGS IVAVTSELAI GGGDRDAHYA AAKGAIVGLV RSLAAEVAAT GVRVNAVAPG
PTDTPLIGPD SPWRDPDYLA RIPLRRLVAP GEVARTVAYL VEEATFMTGE ILSPNAGAVI
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