Gene Noca_3370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_3370 
Symbol 
ID4598768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand- 
Start bp3571248 
End bp3571850 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content75% 
IMG OID639777977 
Productmethyltransferase type 12 
Protein accessionYP_924558 
Protein GI119717593 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.211091 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCGACCT CGCCGCACTC CACCTGGCCC GGACTGTCCG ACAGCGCCCA CTCCGAGTGG 
TACGTCGGAA GGTTCCGGGC GATGGCCGCC AGCGGCCAGG ACCTCCAGGG CGAGTCCCGC 
CTGACCGACG TCCTGGCGCC GCGCGGCGCC CGGCTGCTGG ACGCCGGCTG CGGCCCGGGC 
CGGCACGGCG GGCACCTGGC GCAGCTCGGC CACGACGTCG TCGGCGTCGA CATCGACCCG 
ACGCTGATCG AGGCGGCGCG CGAGGACTAC CCGGGCGTGG CCTGGCTGGT CGGCGACCTG 
GCGACCCTCG ACCTGGCCGC CGCGGGGGAG GCCGAGCCCT TCGACGGCGC GCTGATCGCC 
GGCAACGTCA TGGACTTCGT GACCGAGGAC CACCGGGCGG CGGTGATCGA GCGGGTCGCG 
GCGCATCTCA AGACCGACGG GTTCCTCGTC GTCGGGTGCC GCACCGGCAC CGGCTTCACC 
CCGGCCGACC TGGACGCGAC GCTGCCCGGC GCCGGCCTGC GGCTCGAGCA GCGGTTCGCC 
ACCTGGGACC TGCGCCCGTG GCAGGACGAC TCGTCGTTCT GCGTCAGCGT CCTGCGGCGC 
TGA
 
Protein sequence
MSTSPHSTWP GLSDSAHSEW YVGRFRAMAA SGQDLQGESR LTDVLAPRGA RLLDAGCGPG 
RHGGHLAQLG HDVVGVDIDP TLIEAAREDY PGVAWLVGDL ATLDLAAAGE AEPFDGALIA 
GNVMDFVTED HRAAVIERVA AHLKTDGFLV VGCRTGTGFT PADLDATLPG AGLRLEQRFA 
TWDLRPWQDD SSFCVSVLRR