| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3364 |
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| Symbol | |
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| ID | 4598762 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 3563696 |
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| End bp | 3565288 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639777972 |
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| Product | putative alpha-isopropylmalate/homocitrate synthase family transferase |
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| Protein accession | YP_924553 |
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| Protein GI | 119717588 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00977] 2-isopropylmalate synthase/homocitrate synthase family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0183471 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACCTGC ACGGCGCCTT CCACGTCTAC GACACCACCC TGCGCGACGG CGCCCAGCAG
GAGGGGCTCA ACCTCTCCGT CACCGACAAG CTGTCGATCG CGCGGCAGCT CGACGGGCTG
GGCGTCGGCT ACATCGAGGG CGGCTGGCCG GGCGCGAACC CGAAGGACAC CGAGTTCTTC
CGCCGCGCCG CCGCCGAGCT CGACCTCCAG CACGCGCGGC TCGCGGCGTT CGGCGCCACC
CGGCGCGCGG GCGTCAAAGC GGCCGACGAC CCACTGGTCG CGGCGCTGCG CGACAGCGGC
GCGAGCGTGG TCACGGTGGT GGCCAAGTCC TACGACCGGC ACGTCGAGCT CGCGCTGCGG
ACCACGCTCG AGGAGAACCT CGCCATGATC CGCGACACCG TCAGCCACCT GCGCGCCGAG
GGGCAGACGG TCTTCCTCGA CGCCGAGCAC TTCTTCGACG GCTACCGGGC CAACCGCGAC
TACGCGCTCG AGGTGCTGCG CACGGCGTAC GACGCGGGCG CCGAGGTGAT CGCGCTGTGC
GACACCAACG GCGGGATGCT GCCCGGCTGG GTGAGCGATG TCGTCCACGA CGTGCGCGAG
AACGCCCAGG TGCGGGTCGG CATCCACTGC CACAACGACA CCGGCTGCGC GGTCGCCAAC
ACGCTGGCCG CCGTCGACGC CGGCGCGACC CATGTCCAGG GCACGATCAA CGGGTACGGC
GAGCGCACCG GGAACGCCGA CCTGCTCGCG GTGGTCGCCA ACCTCGAGCT CAAGCTGGAC
CGGCAGGTGC TGCCCCCGGG CCTGCTCACC GAGGCCACCC GGATCGCGCA CGCGGTCGCC
GAGGTCACGA ACTTCCCGCC GGCATCGCGG CAGCCGTACG TCGGCAGCTC CGCGTTCACC
CACAAGGCCG GGCTGCACGC CAGCGCGATC AAGGTGGACC CGAACCTCTA CCAGCACATG
GACCCCGCCG GCGTCGGCAA CGACATGCGG CTGCTGGTCT CCGACATGGC CGGCCGGGCC
TCGATCGAGC TCAAGGGACG CGAGCTCGGT TTCGACCTCT CCGGCGATCG CGACCTCGTC
GCCCGGATCA CCGAGCGGGT CAAGGTGCTC GAGAGTCGTG GGTTCACGTT CGAGGCGGCC
GACGCCTCCT TCGAGCTGCT GCTGATCGAG GAGGTCGAGG GGCAGCGCCC GTCGTACTTC
GACGTCGAGT CGTGGCGGGT GATCACCGAG ACCCTCGCCA AGCGCAGTGC CGGGGAGGAG
GCGGTCTCCG AGGCCACGGT GAAGCTCAAG GCCGGGGGCG TCCGGTACGT CGTCACCGGG
GAGGGCAACG GCCCGGTCAA CGCCCTCGAC CACGCGCTGC GTGAGGCGAT CGTCCAGGCC
TACCCGCAGG TCGCGAAGTT CGAGCTGATC GACTACAAGG TCCGGATCCT CGACCAGGGG
CACGGCACCG ACGCGATCAC CCGGGTGCTG ATCGAGACGA GTGACGGCGA GACCTCCTGG
GTCACCGTCG GGGTCGGCGC CAACGTCATC GAGGCGTCGT GGGGGGCGCT GGTCGACGGG
CTCACGTTCG GGTTGCGCAA GCACGAGGCC TGA
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| Protein sequence | MDLHGAFHVY DTTLRDGAQQ EGLNLSVTDK LSIARQLDGL GVGYIEGGWP GANPKDTEFF
RRAAAELDLQ HARLAAFGAT RRAGVKAADD PLVAALRDSG ASVVTVVAKS YDRHVELALR
TTLEENLAMI RDTVSHLRAE GQTVFLDAEH FFDGYRANRD YALEVLRTAY DAGAEVIALC
DTNGGMLPGW VSDVVHDVRE NAQVRVGIHC HNDTGCAVAN TLAAVDAGAT HVQGTINGYG
ERTGNADLLA VVANLELKLD RQVLPPGLLT EATRIAHAVA EVTNFPPASR QPYVGSSAFT
HKAGLHASAI KVDPNLYQHM DPAGVGNDMR LLVSDMAGRA SIELKGRELG FDLSGDRDLV
ARITERVKVL ESRGFTFEAA DASFELLLIE EVEGQRPSYF DVESWRVITE TLAKRSAGEE
AVSEATVKLK AGGVRYVVTG EGNGPVNALD HALREAIVQA YPQVAKFELI DYKVRILDQG
HGTDAITRVL IETSDGETSW VTVGVGANVI EASWGALVDG LTFGLRKHEA
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