Gene Noca_3360 details

Gene Information

• Locus tag: Noca_3360
• ID: 4598758
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nocardioides sp. JS614
• Kingdom: Bacteria
• Replicon accession: NC_008699
• Strand: +
• Start bp: 3559985
• End bp: 3560611
• Gene Length: 627 bp
• Protein Length: 208 aa
• Translation table: 11
• GC content: 76%
• IMG OID: 639777968
• Product: regulatory protein, TetR
• Protein accession: YP_924549
• Protein GI: 119717584
• COG category: [K] Transcription
• COG ID: [COG1309] Transcriptional regulator

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.683642
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCCGGTCA TGTCCGAGCT GTCCGAGCCG CGCCTCCTCC CCCTCCTCAG CGAGCCGCCC 
GTCGAGCGCC GCGACGCCGC GCGCAACCGC GAGGCGCTGC TCGTCGCCGC CCGGGGGCTG 
GTCGCGCGGT GCGGTGCGGA TCGGGTGACG ATGGACGCCG TGGCCGCGGC GGCCGGCGTC 
GGCAAGGGCA CCGTGTTCCG CCGGTTCGAG TCCCGCGAGG GCCTGATGGC CGCCGTGCTC 
AACCACTCCG AGACGGAGTG GCAGGGGCAG GTGATGTCCG GCCCACCGCC GCTCGGGCCG 
GGCGCGGACC CGTGGGACCG GCTGCTGGCC TTCGGCCGGA CCCGCCTCGA GACGACCCTG 
CTCCACGCCG AGCTGATCCG GGAGGCCGGG CGGGCGGCGA TCCGCGCGGC CGGCGCTTAC 
TCGTTCACCG CCACCCACGT GCGCTACCTG CTGCACGAGC TCGGGGTCAC CGGCGACCTG 
CCCCTGCTCG CCGTCGCCCT GCTCGCGCCG CTGGAGCTGC CCATCCTCGA GCAGCAGGTC 
GAGATCGAGG GTTTCCCGGT CGACCGGCTC TACGAGGGCT GGGTCGACCT GGCGCGGCGG 
ATCGTGGGGC AGGGCGCGTC CGGCTGA 

 

Protein sequence

MPVMSELSEP RLLPLLSEPP VERRDAARNR EALLVAARGL VARCGADRVT MDAVAAAAGV 
GKGTVFRRFE SREGLMAAVL NHSETEWQGQ VMSGPPPLGP GADPWDRLLA FGRTRLETTL 
LHAELIREAG RAAIRAAGAY SFTATHVRYL LHELGVTGDL PLLAVALLAP LELPILEQQV 
EIEGFPVDRL YEGWVDLARR IVGQGASG