Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_3321 |
Symbol | |
ID | 4600213 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 3529520 |
End bp | 3530257 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639777927 |
Product | DeoR family transcriptional regulator |
Protein accession | YP_924510 |
Protein GI | 119717545 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCACGGC AGGCGGAGAC CGTCGAGCTG CTGCTCGAAC GGGGATTCGT TTCGGTCGCG GACCTGGCCA AGCACTTCGA CGTGACCGAG TCCACGGTCC GGCGGACCCT GGCGCAGCTC GAGGCGCGCG ACCTGGTCCA GCGCACCCAT GGCGGGGCGC TGCCGGTGCG GCAGACCGAG GCACCCACCG ATCTCAAGCA GACCCTGCAC CAGGCCGAGA AGAGGGCCAT CGGCAAGGCC ATGGCCCAGC GGATCCTGCC GGGCCAGACG GTCCTGCTCG ACAGCGGGTC GACGACCCTC GAGGTCGCCC GGCACCTGGA GGCCCGCCAG CTGACCGTGG TCACCAACGA CCTGCTGATC GGCAAGGTCA TCGCCGAGCG GCAGAACGCG CACCTCGTGT TCATCGGAGG CGAGCTCTTG CCGAACCTCT ACACGATGTG GGGACCGACG TCGGTCCAAC AGCTGCAGAA CCTCCGGGTC AACCTTGCCG TCTTCGGCGC GGACACGGTG ACGGCCGACG GGATCTACAA CACCACGAGC TACGAGCTGG AGGTCAAGCG CACGATGCGG TCGATCGCGG CGGAGGCATT TCTCGTGGCT GACAGCTCGA AGTTCGGCAG AGAGGCGTTG TTCAAGGTCT TCGACTTCGA TGCCTTCACC GCCGGCATCA CCGATGACCT CATGGCCCCG ATGCGGGCGG CGCAGTTCCC CGTGCCGCTC ATCCGGGCCA AGGTGTAG
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Protein sequence | MSRQAETVEL LLERGFVSVA DLAKHFDVTE STVRRTLAQL EARDLVQRTH GGALPVRQTE APTDLKQTLH QAEKRAIGKA MAQRILPGQT VLLDSGSTTL EVARHLEARQ LTVVTNDLLI GKVIAERQNA HLVFIGGELL PNLYTMWGPT SVQQLQNLRV NLAVFGADTV TADGIYNTTS YELEVKRTMR SIAAEAFLVA DSSKFGREAL FKVFDFDAFT AGITDDLMAP MRAAQFPVPL IRAKV
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