| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3316 |
|---|
| Symbol | |
|---|
| ID | 4600208 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | - |
|---|
| Start bp | 3523577 |
|---|
| End bp | 3524578 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639777922 |
|---|
| Product | Glycerone kinase |
|---|
| Protein accession | YP_924505 |
|---|
| Protein GI | 119717540 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2376] Dihydroxyacetone kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGGAAGA TCATCAACGC CCCGGAGAAC TTCGTCGACG AGTTCGTCGA GGGGATCCTG
CTGGCCCATC CGGACCTGGT GAAGACGCCG GGGGACGACG TGCGAGTCAT GGTGCGGGCC
GATGCGCCGG TTGCCGGACA GGTCGGCATC GTCACCGGCG GTGGCTCGGG TCACCTGCCG
CTGTTCAAGG GGTACGTCGG TAGGGGGCTG TGCTCCGGTG TGGCGATCGG CAACGTGTTC
AGCTCACCCA GCTCTGACCA GATCTTCCAA GCGACCATGG CCGTCGACGG AGGTGCCGGC
GTCCTCTACC TGTACGGCAA CTACGGCGGA GACGTGCTCA ACTTCGACCT CGCCGCTGAT
CTCGCCGACC TCGAGGGGGT CCCGACCATG ACGGTCGTCG GCCGGGACGA CGTCGCAAGC
CAGCCGAAGG ACAACGAGCA CGAGCGTCGG GGCGTCGCGG GCATCTTCTT CGCGTACAAG
GCCGCGGGCG CCGCTGCCGA GCGTGGAGAC TCTCTCGAGC GGGTCGCCGC GATTGCCGAG
GACGTTGTCG CGCACACCGC GACCATCGGG ATCGGTCTGG CGCCGACGAT CCTGCCGACC
ACCGGCAAGC CCAGCTTCGA ACTGCCGGAC GGTCAGATGG AGATCGGCAT CGGCATCCAC
GGCGAGCCCG GGTCACGACG CGGTCCGTTG GAGACCGCCG ACGAGATCGC GACCGACTTC
GTCGAGGCCC TCGTGGGTGA CCTGTCGCTC CGTGAGGGGG CGCGGGTCGC GATCCTGGTC
AACGGGCTCG GTGCGACGCC GCTCGAGGAG CTCTACCTCC TCTACCGACG CGCCCACCAG
CTCCTCGCCG AGCGCGGTAT CGAGATTGTC AAGAGGTACG TCGGCGAGTA CGCCACGAGC
CTCGAGATGG CTGGCGCGTC GATCTCGTTG CTGGAGCTCG ATGACGCACG GCTGGAGCTG
CTGAACGCCC CGGCACTCTC CCCCTTCTTC CAGGAGCGCT GA
|
|---|
| Protein sequence | MRKIINAPEN FVDEFVEGIL LAHPDLVKTP GDDVRVMVRA DAPVAGQVGI VTGGGSGHLP
LFKGYVGRGL CSGVAIGNVF SSPSSDQIFQ ATMAVDGGAG VLYLYGNYGG DVLNFDLAAD
LADLEGVPTM TVVGRDDVAS QPKDNEHERR GVAGIFFAYK AAGAAAERGD SLERVAAIAE
DVVAHTATIG IGLAPTILPT TGKPSFELPD GQMEIGIGIH GEPGSRRGPL ETADEIATDF
VEALVGDLSL REGARVAILV NGLGATPLEE LYLLYRRAHQ LLAERGIEIV KRYVGEYATS
LEMAGASISL LELDDARLEL LNAPALSPFF QER
|
|---|
| |