Gene Noca_3299 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_3299 
Symbol 
ID4598171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand+ 
Start bp3505319 
End bp3506041 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content77% 
IMG OID639777905 
Productregulatory proteins, IclR 
Protein accessionYP_924488 
Protein GI119717523 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.395884 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACAATT CCAGCGGAGT GGGCGTCCTC GACAAGGCCG CCCTCGTGCT CACCGCCCTC 
GAGTCCGGCC CGGCCACGCT GGCGGGCCTG GTCGCCGCCA CCGGACTGGC CCGGCCGACC 
GCACACCGGC TGGCCGTGGC GCTCGAGCAC CACCGCCTGG TCGCCCGCGA CATGCAGGGC 
CGGTTCGTGC TCGGCCCCCG CCTCGCCGAG CTGTCCGCCG CTGCCGGCGA GGATCGTCTG 
CTCGCCACCG CCGGACCGGT CCTCGCGCGG CTGCGCGACA TCACCGGCGA GTCCGCCCAG 
CTGTGGCGCC GCCAGGGCGA GCATCGCGTG TGCGTGGCCG CCGCCGAGCG CCCCAGCGGC 
CTGCGGGACA CGATCCCGGT CGGCTCGCAG CTGACCATGC GGGCCGGGTC GGCCGCCCAG 
ATCCTGCTGG CCTGGGAGGA CCCCGAGCGG ATGCACCGGG GCCTGCAGAA CGCCGCCTTC 
TCCGCCGCCG CACTCTCCGG GATCCGGCGT CGCGGCTGGG CCCAGTCGGT CGGCGAGCGC 
GAGCAGGGCG TGGCGTCCGT CTCCGCGCCC GTCCGCTCCC CCGGCGGCAA GGTGATCGCC 
GCCGTCTCCG TCTCCGGCCC GCTCGAGCGG CTCTCCCGCC AGCCCGGCCG GATGCACGCG 
CCCGCGGTCC TCGCCGCCGC CGAGCGGCTC AGCGAGTCCC TACGGCGAGC CGCCGCGGAG 
TAG
 
Protein sequence
MDNSSGVGVL DKAALVLTAL ESGPATLAGL VAATGLARPT AHRLAVALEH HRLVARDMQG 
RFVLGPRLAE LSAAAGEDRL LATAGPVLAR LRDITGESAQ LWRRQGEHRV CVAAAERPSG 
LRDTIPVGSQ LTMRAGSAAQ ILLAWEDPER MHRGLQNAAF SAAALSGIRR RGWAQSVGER 
EQGVASVSAP VRSPGGKVIA AVSVSGPLER LSRQPGRMHA PAVLAAAERL SESLRRAAAE