| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3294 |
|---|
| Symbol | |
|---|
| ID | 4598166 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | - |
|---|
| Start bp | 3500744 |
|---|
| End bp | 3501547 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639777900 |
|---|
| Product | phospholipid/glycerol acyltransferase |
|---|
| Protein accession | YP_924483 |
|---|
| Protein GI | 119717518 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase |
|---|
| TIGRFAM ID | [TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.67887 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACGGTAC GCAAGCTCCA GCAGAAGCGC GGATGGGCGT GGAACCTCGC GGTCCCCGTG
ATCAAGCCGC TGCTGCTGGC CACCACCACC CGCGAGTGGG TCGGCGGCGA GAACATCCCC
GAATCCGGTG GGTTCATCCT CGCGCTCAAC CACGTCTCGC ACGTCGACCC GCTCACCGCC
GCGCACCTGG TGTACGACCA CGGCCGGCTG CCGCGCTACC TCGCGAAGTC AGGGCTGTTC
AAGAGCCGTG CCGGCGCCTT CTTCTTCACC GCGGCCGGAC AGATCCCGGT CGAGCGGTTG
ACCACGAACG CCGCGGGCGC GTACGAAGCG GCCGTCGACG CCGTGCGCCG CGGCGAGTGC
GTCGTGGTCT ATCCCGAGGG CACGATCACC CGCGACCCCG GTGGCTGGCC GATGACCGGC
AAGTCCGGTG CCGCCCGCAT CGCGCTGGCC ACCGGGTGCC CGGTGATCCC GGTCGGGCAG
TGGGGCGCGC AGCAGCTGCT CGCGCCGTAC GGGAAGTTGC CGGACCTGTT CCCGCGCAAG
CGGATCCAGA TGCGGGTCGG CCCCCCCGTC GACCTGACCG ACCTGCTCGG CCAGCCGCAG
ACCACCGCCG TCGTGCAGCA GGCGACCGAC CGGATCATGG CCGCGATCAC GGGCCTGGTC
GAGGAGGTCC GTGGCGAGAC CGCCCCGGCC GAGCGGTTCG ACATGCGCAA GGCCGGCGTG
CGCCAGATCG GCAACCCCAA CAAGGAGCCG AAGGGGACCA CGAGCCGCAG CCCCCGGAAG
CGGGCCCCCG AGGAGAGCGC ATGA
|
|---|
| Protein sequence | MTVRKLQQKR GWAWNLAVPV IKPLLLATTT REWVGGENIP ESGGFILALN HVSHVDPLTA
AHLVYDHGRL PRYLAKSGLF KSRAGAFFFT AAGQIPVERL TTNAAGAYEA AVDAVRRGEC
VVVYPEGTIT RDPGGWPMTG KSGAARIALA TGCPVIPVGQ WGAQQLLAPY GKLPDLFPRK
RIQMRVGPPV DLTDLLGQPQ TTAVVQQATD RIMAAITGLV EEVRGETAPA ERFDMRKAGV
RQIGNPNKEP KGTTSRSPRK RAPEESA
|
|---|
| |