| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3291 |
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| Symbol | |
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| ID | 4598163 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 3497459 |
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| End bp | 3498580 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639777897 |
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| Product | D-alanine--D-alanine ligase |
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| Protein accession | YP_924480 |
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| Protein GI | 119717515 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.304475 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGAGT CCAGCCGCCG ACCCCGGGTC GCCGTCGTCT TCGGCGGCAA GTCCAGCGAG
CACGCGATCT CGTGCGTCAC GGCCGGCAGC GTGCTGGCCG CGATCGACCG GGCGGCGTAC
GACGTCGTCC CGATCGGCAT CGCCACCGAC GGCCGCTGGG TGCTGGAGTC GGGCGACCCC
GAGCGGCTGC GCATCGAGGG CCCCGACCGG CTGCCCCACG TCGACGGCGA ACGCGCGGCG
ATCGCGCTGG CCCCGGACAC CGCATCGACG AGCCTGGTCG TCACCGAGCC GGCACAGCCC
CCGCGCGCGC TGGGGGAGGT GGACGTGGTG TTCCCGCTGC TGCACGGTCC GTGGGGCGAG
GACGGCACCA TCCAGGGCCT GCTCGAGATG GCCGGTGTCC GGTACGTCGG CGCCGGGGTG
CTCGCGTCCG CGGTGAGCAT GGACAAGGCG TACATGAAGG TGGTGCTGGC CGCCGCCGGC
CTGCCGGTGC TGCCGTCGGT GACCGTGACC ACCCGTGAGT GGGCGCGTGA CGCCGCCGGC
TGCCGCGCTC GCGCCGACGA GATCGGCTAC CCGCTGTTCG TCAAGCCCGC GCGGGGCGGC
TCGAGCCTCG GCATCTCCAA GGTCCACGAC GCGACCGAGC TCGACGGCGC GATCGAGCTG
GCCTTCGAGC ACGACCCGAA GGTGCTGGTC GAGACGGCGG CGATCGACGC CCGGGAGGTC
GAGTGCGGCG TGCTGCAGGC CGTCGACGGG ACCCCGGAGA CCAGCGTGCC CGCCGAGATC
CGGATCTCCG GTGCGCACGA GTTCTACGAC TTCGCCGCGA AGTACCTGCC GGAGGAGCAC
ACCGAGCTGG ACGTGCCGGC CGACCTGCCC GAGGCGCTGG TCCGCCAGGT CCGGGAGCTG
TCCGTGCGCG CCTTCGAGGC GGTCGGCTGC GAGGGCCTGG CCCGGGTCGA CTTCTTCGTG
CTCCCCGGTG AGCGGCTCGT GGTCAACGAG ATCAACACGA TGCCGGGCTT CACGCCGACC
TCGATGTTCC CGCGGATGTG GGCGGCCTCG GGCCTGGACT ACCCGGCGCT CGTGGACCGG
TTGATCCAGC TCGCGTTGCG GCGCGACACC GGGCTGCGCT GA
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| Protein sequence | MNESSRRPRV AVVFGGKSSE HAISCVTAGS VLAAIDRAAY DVVPIGIATD GRWVLESGDP
ERLRIEGPDR LPHVDGERAA IALAPDTAST SLVVTEPAQP PRALGEVDVV FPLLHGPWGE
DGTIQGLLEM AGVRYVGAGV LASAVSMDKA YMKVVLAAAG LPVLPSVTVT TREWARDAAG
CRARADEIGY PLFVKPARGG SSLGISKVHD ATELDGAIEL AFEHDPKVLV ETAAIDAREV
ECGVLQAVDG TPETSVPAEI RISGAHEFYD FAAKYLPEEH TELDVPADLP EALVRQVREL
SVRAFEAVGC EGLARVDFFV LPGERLVVNE INTMPGFTPT SMFPRMWAAS GLDYPALVDR
LIQLALRRDT GLR
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