| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3280 |
|---|
| Symbol | |
|---|
| ID | 4599142 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | - |
|---|
| Start bp | 3487632 |
|---|
| End bp | 3488519 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 639777886 |
|---|
| Product | formamidopyrimidine-DNA glycosylase |
|---|
| Protein accession | YP_924469 |
|---|
| Protein GI | 119717504 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
|---|
| TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCCGGAGC TGCCCGAGGT CGAAGTGGTG CGCGCCGGCC TCGAGCGGCA CGTGCTCGGC
GCCACGATCG CCCGCGTCGA CGTGCTGCAC CCGCGGCCGG TGCGCCGCGA CCTGCGCGGC
CCGGCCGGCT TCGCCGCCGC GCTGACCGGC CGCCGCATCG AGGCGGCCCG CCGACGCGGC
AAGTACCTCT GGCTGCCGCT GGACAACGGC GACGCGCTGC TCGGCCACCT GGGCATGAGC
GGCCAGCTGC TCGTCCAGCC GCCCGATGCC CCCGACGAGC GGCACCTGCG CGTGCGGCTC
GCGCTCGAGG GCGCCGACGA GGGCAGGGAG CTGCGGTTCG TCGACCAGCG GATGTTCGGC
GGTCTGTCGG TCTCGGCGGG CGGCGCGGAC CTGCCGCCCG AGATCGCGCA CATCGCCCGT
GACCCGCTCG ATCCCGAGTT CGACGACGAC GACTTCGTGC GCCGGGTGCG CCGGCGTACG
TCGGGGGTCA AGCGACAGCT CCTGGACCAG AACCTGATCT CCGGGGTCGG CAACATCTAC
GCCGACGAGG CGCTGTGGCG CGCGCGGATC CACGGCGAGC GCCCGGGCGA CCGGCTCACC
GCGACCCGGG TCCGTGAGCT CCTCGCCCAC GCGCGCGAGG TGATGCTCGC GGCGCTGGGG
GAGGGCGGCA CCTCCTTCGA CGCGCTCTAC GTCAACGTCA ACGGCGAGTC GGGCTACTTC
GACCGCTCGC TGCACGCGTA CGGGCGCGAG GGCGAGGCGT GCGAGCGCTG CGGCACGCCG
ATCCGGAGGG TCGCGTTCAT GAATCGGTCG TCGTACTTCT GCCCGGTGTG CCAGCCGGCG
CCCAGGAGAC GTCGGGCGGC CTCCTCGCGG GTGCGGGTCC CGGACTGA
|
|---|
| Protein sequence | MPELPEVEVV RAGLERHVLG ATIARVDVLH PRPVRRDLRG PAGFAAALTG RRIEAARRRG
KYLWLPLDNG DALLGHLGMS GQLLVQPPDA PDERHLRVRL ALEGADEGRE LRFVDQRMFG
GLSVSAGGAD LPPEIAHIAR DPLDPEFDDD DFVRRVRRRT SGVKRQLLDQ NLISGVGNIY
ADEALWRARI HGERPGDRLT ATRVRELLAH AREVMLAALG EGGTSFDALY VNVNGESGYF
DRSLHAYGRE GEACERCGTP IRRVAFMNRS SYFCPVCQPA PRRRRAASSR VRVPD
|
|---|
| |