Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_3278 |
Symbol | |
ID | 4599140 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | - |
Start bp | 3484532 |
End bp | 3485779 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639777884 |
Product | major facilitator transporter |
Protein accession | YP_924467 |
Protein GI | 119717502 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.471566 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCAGCC TGGCCGAGAT CGTCGCACCC CGCCGGCTCG GCACCGGGTT CCGGTGGCTG CTCGCGTCGT CCTGGGTGAG CAACCTCGGC GACGGACTGG CCCTCGCCGC CGGGCCCCTG CTGGTGGCGT CCCAGACCCA CGACCCGTTC CTCGTCGCGC TCGCGGCGCT GCTCCAGTGG CTGCCGCCGC TGCTGTTCGG GCTGTACGCC GGGGCGCTCG CCGACCGCCT CGACCGCCGG CTGATCGTGG TGACGGTCGA CCTGTTGCGC GCCGTCGTCC TGGTGCTCCT CACGCTCGCG ATCGCGACCG ACCTGGTCAC GATCACGCTG GTGCTCGTCA CGATGTTCCT GCTCGGCACC GCGGAGGTGT TCGCCGACAA CACCGCGTCG ACGCTGCTGC CGATGCTGGT GCACCGCGAC GACCTCGGCG TCGCCAATGC CCGGCTGACC ACCGGCTTCA TCACCGTCAA CCAGCTCGCC GGCCCGCCGA TCGGCGCGGC CCTGTTCGCC GCCGGGCACG CCGTGCCGTT CGTCGCGCAG GCGGTGGTGG TGGCGCTCGG CGCGCTGCTC GCCGCGCAGA TCGCGCTGCC GCCGCACGGG CGGTCCCGCG ACGAGCGGCC GCAGCTGCGC CAGGACGTGG TCGAGGCGTT CCGCTGGGTG CTGCACAACG CCGCCGTACG CACCCTGGTG CTGACGATCT TCGTCTTCAA CATCACCTTC GGCGCGGCCT GGTCGATCCT GGTCCTCTAC GCCACCCAGC GGCTCGGGAT GGGGGAAGTC GGCTTCGGGC TGCTGACCAC GGTGTCAGCG ATCGGCGGCC TGATCGGAAC CCTCGCCTAC GGCTGGATCA CCCGCCGGGT CAGCCTCGCC AACATCATGC GAGCGGGCCT GGTCTTCGAG ACCTTCACCC ACCTGGCGCT CGCCCTCACG ACGCGGCCGG CGGTGGCGAT GGCGATCTTC TTCGTCTTCG GCGCCCACGC CTTCATCTGG GGCACGACGT CGACCACCGT CCGGCAGCGC GCCGTGCCCG GCGAGCTGCA GGGCCGGGTC GGCAGCGTCA ACCTGGTCGG CGTGTTCGGC GGCCTGGTCA TCGGCTCCGG CATCGGTGGT GGTCTCGCCC AGCACTGGGG CGTGACCGCG CCGTTCTGGT TCGCGTTCGC CGGCTCCGCG GTCTTCGTCG TGCTGATCTG GGGCCAGCTG GTCCACATCG CGCACGCCGA CGAGCAGGGG CAGCCGGCGG GGGCCTGA
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Protein sequence | MTSLAEIVAP RRLGTGFRWL LASSWVSNLG DGLALAAGPL LVASQTHDPF LVALAALLQW LPPLLFGLYA GALADRLDRR LIVVTVDLLR AVVLVLLTLA IATDLVTITL VLVTMFLLGT AEVFADNTAS TLLPMLVHRD DLGVANARLT TGFITVNQLA GPPIGAALFA AGHAVPFVAQ AVVVALGALL AAQIALPPHG RSRDERPQLR QDVVEAFRWV LHNAAVRTLV LTIFVFNITF GAAWSILVLY ATQRLGMGEV GFGLLTTVSA IGGLIGTLAY GWITRRVSLA NIMRAGLVFE TFTHLALALT TRPAVAMAIF FVFGAHAFIW GTTSTTVRQR AVPGELQGRV GSVNLVGVFG GLVIGSGIGG GLAQHWGVTA PFWFAFAGSA VFVVLIWGQL VHIAHADEQG QPAGA
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