| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3275 |
|---|
| Symbol | |
|---|
| ID | 4599137 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | - |
|---|
| Start bp | 3480471 |
|---|
| End bp | 3481688 |
|---|
| Gene Length | 1218 bp |
|---|
| Protein Length | 405 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639777881 |
|---|
| Product | transposase |
|---|
| Protein accession | YP_924464 |
|---|
| Protein GI | 119717499 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0675] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.151083 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGTTCA ACCACCAGAT CGCCCGGGTG AAGGCCAACC TGGACCAGCG CGCTGCGGAG
AGGTCGTACG GCGTCGCGGA CGCGGGCCTG ACCCCGGGGC AGTCGTGGTC GAAGGTTTCC
CTCATCAACC ACATGAACCG GTGGAAGGAC GGTCGCGACC CGTCCGCGCA CGTCAACGAC
GACGGCACCC GCGGGCTGAC CTGGCGCGGT GAGGTCTCGG CCGACGTGTT CGAGACCGCC
AGCGTGAACG CTGCGCAGGC GTTGCAGAAC TGGACCGACT CGAAGAAGGG CACCCGTGCG
GGCAAGGCGG CCGGGTTCCC GCGGTTCAAG TCCCGGCACA AGACCACCCC GGCGTTCCGG
CTCCGCTCCA AGTACACCGA GGGCGAGGCT CCGCCGGTGC GGCCGACCGG ACCGCGCACG
ATGCGGTTCC CCAAGCTCGG CGAGCTCCGG GTCCACGAGC ACACCGGCCG TCTCGCGAAG
ATGCTCGACC GCGGCCGGTT CCACGCGTAC GCGGCGTCGT TCCGCTACGA GCGCGGGCGC
TGGGTCGTCT CCATCACCGG CGTCGCAGCC GAGTTCCACC ACCAGTGCCG CACCGCCCCC
GACCGACACC CGGCCCGGGT CGGTGTTGAC CTCGGCGTGA AGACACTCGC GGTCGTCGCC
GACGAGCACG GACGCCAGCT GCAGGCGCAC GAGGGGGTGA AAGCGCTGCA GCACGCCCAG
GCACGCCTCA GGCTCGCCGA CCAGGCCTAC TCGAGAACCA AGAAGGGATC TGGTGGCCGA
GCGAAGGCAG CACGACGCCT GGGCAAGATG CACGGACGTG TCGCCGCCAT CCGCAAATAC
CTGCTGCACC GGATCACCAC GGAGCTCGCA CGGGCGTACG TCAGCGTGAC GATCGAGGAC
CTGAACGCAG CAGGGATGCT CCAGATCCGG TCGTTGGCGC GGCATGTCTC GGACGCGGCG
TTCGGAGAGT TCCGCAGGCA AGTCGCCTAC AAGACGGCCT GGTACGGCAC CGAGCTGATC
GTCGCGGACC GGTGGTTCCC GTCCTCGAAG ACGTGCTCCG GCTGCGGCAA CATCGACCCC
GACCTGACAC TGTCGGACCG CACGTACGGG TGCTCCGGCT GCGGCCTGGT CATCGACCGC
GACCTGAACG CCGCCATCAA CCTCGCCCGC TACGGGCAGG ACACCCAGAC TTCTCCGCCG
CTACCCGCGG CCGCCTGA
|
|---|
| Protein sequence | MAFNHQIARV KANLDQRAAE RSYGVADAGL TPGQSWSKVS LINHMNRWKD GRDPSAHVND
DGTRGLTWRG EVSADVFETA SVNAAQALQN WTDSKKGTRA GKAAGFPRFK SRHKTTPAFR
LRSKYTEGEA PPVRPTGPRT MRFPKLGELR VHEHTGRLAK MLDRGRFHAY AASFRYERGR
WVVSITGVAA EFHHQCRTAP DRHPARVGVD LGVKTLAVVA DEHGRQLQAH EGVKALQHAQ
ARLRLADQAY SRTKKGSGGR AKAARRLGKM HGRVAAIRKY LLHRITTELA RAYVSVTIED
LNAAGMLQIR SLARHVSDAA FGEFRRQVAY KTAWYGTELI VADRWFPSSK TCSGCGNIDP
DLTLSDRTYG CSGCGLVIDR DLNAAINLAR YGQDTQTSPP LPAAA
|
|---|
| |