| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3261 |
|---|
| Symbol | |
|---|
| ID | 4599123 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | + |
|---|
| Start bp | 3461515 |
|---|
| End bp | 3462402 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639777867 |
|---|
| Product | response regulator receiver |
|---|
| Protein accession | YP_924450 |
|---|
| Protein GI | 119717485 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTCGGAAG TCTCGGTCAC CCAGCCAGTA GCCCTCGTCA TCGACGATGA TCAAGACACC
GTCGACCTGC TGGAGGTGCT GCTGAGCCAG GCCGGCTTCG GAGTCGTCAC CGCGACCAAC
GGGCCCGACG GTATCGCGCT CGCCCTCGAG CACCGCCCCG CGCTGGCGAC CATCGACGTC
ACGATGCCCG AGATGGACGG CCTGGAGGTG ACCCGGCGGG TTCGGGAGGC GACGCCCACC
TACATCGTCA TCATCAGCAG CCGGTCCCAG GAGCACGACG TGCTGGCGGG CTTCGACGCC
GGCGCCGACG ACTACATCCC CAAGCCGATC CGCCCGCGCG AGCTGCAGGC CCGTCTGGCC
GCGGTCGCCC GCCGGCCCAT CGCCTCGGTG ACGGGCGGGC CCACCGCCAC GGCGTGGGCA
CCGGCCGCCG AGGACGCCGC TCGGTCGGAG TACCTGCGGC TGGTCGTCTC CGGAGAGGCG
GTCGGCTTCG ACCACGAGGA CGAGGCCGAG GGCCAGGACG GCCGCGACGG GATGCTCGAG
CTGGGCATGC GCTTCGTCGG CAGCTGGATC GAGTTCCACG GCCTGCGGAT CAACCCGGCT
CGTGACCTGC TCGTCATCGA CGACCTGATC GTCGACGCGC TGCCGGAGCA GATCAAGCTG
ATCGAGACGA TGCTGTACGC CGGCACGCTG ACCTTGACCG CCCGCCAGCT CGCACTCCGC
TACCGCGGCG AGAGCGAGGA GGCACCCACC AGGGGCCCCG AGCAGGACCG GAAGTGGTTC
GACGCGGAGA TCCCCAAGCT GCTCATCCAG ATCGGCGACG ACGCCGTGTG GCCGCGCTGG
TTCCGCGTGA ACCAGGGCAC GTTGCAGCTC GTGGACCGGC GGGTCTGA
|
|---|
| Protein sequence | MSEVSVTQPV ALVIDDDQDT VDLLEVLLSQ AGFGVVTATN GPDGIALALE HRPALATIDV
TMPEMDGLEV TRRVREATPT YIVIISSRSQ EHDVLAGFDA GADDYIPKPI RPRELQARLA
AVARRPIASV TGGPTATAWA PAAEDAARSE YLRLVVSGEA VGFDHEDEAE GQDGRDGMLE
LGMRFVGSWI EFHGLRINPA RDLLVIDDLI VDALPEQIKL IETMLYAGTL TLTARQLALR
YRGESEEAPT RGPEQDRKWF DAEIPKLLIQ IGDDAVWPRW FRVNQGTLQL VDRRV
|
|---|
| |