| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3244 |
|---|
| Symbol | |
|---|
| ID | 4599182 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | + |
|---|
| Start bp | 3446350 |
|---|
| End bp | 3446985 |
|---|
| Gene Length | 636 bp |
|---|
| Protein Length | 211 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 639777850 |
|---|
| Product | peptidase M23B |
|---|
| Protein accession | YP_924433 |
|---|
| Protein GI | 119717468 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.6882 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAGCC GACCCACCGC CCGCCACGTC GTCCCGACCC TCCTACTGGG TCTGGTGCTG
GTCCTGCTCG CCGCGCCGCC CGCCTCGGCG GGCGAGACCG ACCCGGTCGG CGTGTGGCCG
TTGCTGCCCG CACCCTCGGT CGTCGCCGGG CTCGACCCGC CCGATGACCC GTGGGGCGCC
GGGCACCGTG GCGTCGACCT GCTCGGCTCG CCGGGTCAAC CGGTCCGCGC CGCACTGCCG
GGCCGGGTCA CCTGGGCCGG GCCGCTGGCC GGGCGCGGTG TGGTGGTCGT GGACCACGGC
GCGACCCGCA CGACCTACGA GCCCGTCGAC GCCTCGGTCG GCGTGGGCGC GACGATCGCG
GCAGGCGATC GGATCGGCCG GCTCTCGGCC GTCGGGTCGC ACTGCCCGCC ACGGGCGTGC
CTGCACTGGG GATGGATCCG CGGTGACACC TACCTCGACC CACTGCGGCT CGTCGGCGCC
GGACCGGTGC GACTGTTGCC GCTCTGGCGC GACGAGCCGG TCGGCCGCGG CGCCGTCGCG
TCGCCGTGGC GTCCGCCGTC GCTGGTGTAC GCCGGCTGGG TCGCGCCGAT GGCGCTATGG
GCCCGTCCTC AGGCTCTGGG GTGTGCCTGC TGGTAG
|
|---|
| Protein sequence | MASRPTARHV VPTLLLGLVL VLLAAPPASA GETDPVGVWP LLPAPSVVAG LDPPDDPWGA
GHRGVDLLGS PGQPVRAALP GRVTWAGPLA GRGVVVVDHG ATRTTYEPVD ASVGVGATIA
AGDRIGRLSA VGSHCPPRAC LHWGWIRGDT YLDPLRLVGA GPVRLLPLWR DEPVGRGAVA
SPWRPPSLVY AGWVAPMALW ARPQALGCAC W
|
|---|
| |