Gene Noca_3243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_3243 
Symbol 
ID4599181 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp3445022 
End bp3445945 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content70% 
IMG OID639777849 
ProductSSU ribosomal protein S2P 
Protein accessionYP_924432 
Protein GI119717467 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0052] Ribosomal protein S2 
TIGRFAM ID[TIGR01011] ribosomal protein S2, bacterial type 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.191936 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGTCG TGACCATGCG CCAGCTTCTC GAGAGCGGCG TGCACTTCGG GCACCAGACC 
CGTCGCTGGA ACCCGAAGAT GAAGCGCTTC ATCATGACCG AGCGCAACGG CATCTACATC
ATCGACCTGC AGCAGTCGTT GGCCTACATC GACCGGTCCT ACGCCTTCGT CAAGGAGACG
GTGGCCAAGG GCGGCACGAT CATGTTCGTC GGCACCAAGA AGCAGGCCCA GGAGGCGATC
GCCGAGCAGG CGACCCGGGT CGGCATGCCG TACGTCAACC AGCGCTGGCT CGGCGGCATG
CTCACGAACT TCTCGACGGT GCACCAGCGG ATCAACCGCC TCAAGGAGCT CGACGAGATC
GACTTCGACG ACGTGGCCGG CAGCAGCCGC ACCAAGAAGG AGCTGCTGCA GATGCGCCGC
GAGCGCGACA AGCTGAACAA GTCGCTCGGC GGCATCCGCG AGATGACGCG GACCCCCTCC
GCCGTCTGGA TCGTCGACAC CAACAAGGAG CACCTGGCGG TCGAGGAGGC GCGCAAGCTG
CGCATCCCGA TCATCGGCAT CCTGGACTCC AACTGCGACC CCGACCTGGT CGACTTCCCG
ATCCCGGGCA ACGACGACGC GATCCGCGCG GTCGGCCTGC TGACCCGCGT GGTCGCCGAC
GCCGTCGCGG AGGGCCTGAT CGCCCGCTCG GGCGTCAAGG CCGGCGAGGG CGCCGAGGCC
GTGGGCGCCG AGGAGCCGTT GGCCGAGTGG GAGCGCGAGC TGCTGGGCGG CGAGGCCGAG
CAGGCCGCGG TCGACGCGAC CGGCGGTGCC GCCACCGAGG AGACCCCTGC CGCGGAGTCG
ACCGGTGCGG CCAGCGAGGC TGCAGCGGTC AGCGAGGCGG CCGAGCCTGC CACCGAGCAG
CCGGCCGCCG ACGCCGAGGC CTGA
 
Protein sequence
MAVVTMRQLL ESGVHFGHQT RRWNPKMKRF IMTERNGIYI IDLQQSLAYI DRSYAFVKET 
VAKGGTIMFV GTKKQAQEAI AEQATRVGMP YVNQRWLGGM LTNFSTVHQR INRLKELDEI
DFDDVAGSSR TKKELLQMRR ERDKLNKSLG GIREMTRTPS AVWIVDTNKE HLAVEEARKL
RIPIIGILDS NCDPDLVDFP IPGNDDAIRA VGLLTRVVAD AVAEGLIARS GVKAGEGAEA
VGAEEPLAEW ERELLGGEAE QAAVDATGGA ATEETPAAES TGAASEAAAV SEAAEPATEQ
PAADAEA