| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3228 |
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| Symbol | |
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| ID | 4599166 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 3429145 |
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| End bp | 3430278 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639777834 |
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| Product | spermidine/putrescine ABC transporter ATPase subunit |
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| Protein accession | YP_924417 |
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| Protein GI | 119717452 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.999114 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCTGAGC GCAACGCGGA CCTGAGGCTG GAGAACCTGA CCAAGCGCTT CGGGGACTTC
GTCGCGGTCG ACGACCTGTC GCTGACGGTG CCGAACGGCT CGTTCTTCGC TCTCCTCGGG
CCGTCGGGGT GCGGCAAGAC CACCACGCTG CGGATGGTGG CCGGGTTGGA GGACCCGACC
GCAGGCCGGG TGCGGATCGG CGAGGACGAC ATCACGCACC TGCGTCCCTA CAAGCGGCCG
GTCAACACGG TCTTCCAGTC CTACGCGCTG TTCCCGCACC TGACGATCTC CGAGAACGTC
GCGTTCGGGC TGCGGCGCCG CGGCGTGAAG GACTACCAGC AGAAGACCCG TGACATGCTC
GAGCTCGTCG AGCTCGGCGG CTACGGGGAC CGCAAGCCGG GCCAGCTCTC GGGCGGCCAG
CAGCAGCGGG TCGCCCTCGG CCGGGCCCTG ATCAACGAGC CGGGCGTGCT GCTGCTCGAC
GAGCCGCTGG GCGCGCTGGA CCTCAAGCTG CGCCGGCAGA TGCAGATCGA GCTCAAGCGG
ATCCAGACCG AGATCGAGGT CACCTTCGTG CACGTCACGC ACGACCAGGA GGAGGCCATG
ACGATGGCCG ACACCATCGC CGTGATGAAC CACGGGGTGA TCGAGCAGAT GGGCGCGCCG
GCGGACCTGT ACGAGAACCC GGTGACGACG TTCGTCGCCA ACTTCCTCGG CCAGTCGAAC
CTCGTCCGGG CCGAGGTCAT CGACGCGACG GGTGCCGACG TCGTCGTCGA CTGCCACGGC
CAGAAGCTCC GGTTGGCGGC GTCGCGCTCG CACACCGCCG GGCGGAGCGC CTGGCTCGGG
GTCCGGCCGG AGAAGGTGCT CATCGCCGAG GCCGGCACCG AGGACCACGC TGGGGTCAAC
GCCCTCACCG GTGGCCGGGT CAGCGACGTC AGCTTCGTCG GGGTCAGCAC GCAGTACCTC
GTCGCGACCG CCTGGGGGCA GGAGCTGATG GTGTTCGAGC AGAACACCGG GCGGCGCCCT
GCCTTCCGCA ACGGTGACGA GGTGGACCTG CTGTGGGCGC CCGAGCACAC GTTCCTGCTC
GACGCCGATC AGGATGCCCA GGCCGGCCTG ATGACGCCGG AGGACAAGGA GTGA
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| Protein sequence | MAERNADLRL ENLTKRFGDF VAVDDLSLTV PNGSFFALLG PSGCGKTTTL RMVAGLEDPT
AGRVRIGEDD ITHLRPYKRP VNTVFQSYAL FPHLTISENV AFGLRRRGVK DYQQKTRDML
ELVELGGYGD RKPGQLSGGQ QQRVALGRAL INEPGVLLLD EPLGALDLKL RRQMQIELKR
IQTEIEVTFV HVTHDQEEAM TMADTIAVMN HGVIEQMGAP ADLYENPVTT FVANFLGQSN
LVRAEVIDAT GADVVVDCHG QKLRLAASRS HTAGRSAWLG VRPEKVLIAE AGTEDHAGVN
ALTGGRVSDV SFVGVSTQYL VATAWGQELM VFEQNTGRRP AFRNGDEVDL LWAPEHTFLL
DADQDAQAGL MTPEDKE
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