| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3226 |
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| Symbol | |
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| ID | 4599164 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 3427386 |
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| End bp | 3428255 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639777832 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_924415 |
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| Protein GI | 119717450 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.698414 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCACGA GCACGCAGCT GCCCGCCCCC AGCCGCACCA GGCGCAGCGG CCGCGACCGG
CCGCCGGTCG GCCGCTGGCT GGCCGATCAC ATGGTCCTGT TCATCGGGAT CCTGGTGCTC
GTCTACATGT TCGTACCGAT CGGCTACATC TTCGCGCTGT CGTTCAACCA ACCCACCGGA
CGCTCCGCGA CCGCGGAGTT CGAGTCGTTC ACCTGGAGCA ACTGGACCTC GATCTGCGAG
CCCGAGGGCC TGTGCGACTC ACTCCAGCTG AGCATCGCCG TGAGCCTGAC CGCCACCGTG
CTGGCCACCG TGCTGGGCAC GCTGATGGCG TTCGCCCTGG TGCGGCACTC CTTCCGGGGC
CGGGCGGCGT CGAACCTCCT GATCTTCCTG CCGATGGCGA CCCCGGAGGT CGTCATGGGG
TCCTCGTTGC TGGCGATGTT CGTCTCGATC GGGATGGACG GCGCCCTCGG CTTCGCCACG
CTCGTGATCG CCCACGTGCT GTTCTGCCTG TCGTTCGTGG TCGTGACCGT CAAGGCGAGG
CTCGTCGGCA TGGACGCCCG GTTGGAGCAG GCGGCGATGG ACCTCTACGC GAACGAGTGG
CAGACCTTCC GGCTGGTCAC CCTGCCGCTG GCGATGCCGG GCATCGTCGC GGCGGCGCTG
CTGTCCTTCT CGCTGTCCTT CGACGACTTC ATCGTCTCGA ACTTCACGGC CGGCCAGTCG
GTCACCTTCC CGATCTTCGT CTACGGCAGC AAGCTGAAGG ACTTCCCGCC GCAGCTGTTC
GTCGTGGGGT CGATCATGTT CCTGGTGTCG TTCGTCTTCG TGGTCGCCGG CGAGCTGTGG
CGGCGCCGTC GGTCGGTCGG CCTGGGCTGA
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| Protein sequence | MATSTQLPAP SRTRRSGRDR PPVGRWLADH MVLFIGILVL VYMFVPIGYI FALSFNQPTG
RSATAEFESF TWSNWTSICE PEGLCDSLQL SIAVSLTATV LATVLGTLMA FALVRHSFRG
RAASNLLIFL PMATPEVVMG SSLLAMFVSI GMDGALGFAT LVIAHVLFCL SFVVVTVKAR
LVGMDARLEQ AAMDLYANEW QTFRLVTLPL AMPGIVAAAL LSFSLSFDDF IVSNFTAGQS
VTFPIFVYGS KLKDFPPQLF VVGSIMFLVS FVFVVAGELW RRRRSVGLG
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