| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3218 |
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| Symbol | |
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| ID | 4599156 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 3416498 |
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| End bp | 3417895 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 639777824 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_924407 |
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| Protein GI | 119717442 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.578565 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGCCGGA TCCCCGTGCT GGTCGTGGTG CTGGTGCTGG TCGCGCTGCT GCTCGGCGGA
GTGCCGGCTG TCGCCGCACC GGGCGGGGAC CGTCCGATCG GGCCCTGCTC GCGCGGGCTG
GTTGCCCTCA CCTTCGACGA CGGGCCGTCG ACGGCCGTGA CGCCCCGGCT GGCTCACCGG
CTGGACCGGC TCGGAGTGCC GGCGACCTTC TTCGTGGTCG GCACCCGGGT GGCCGCCCAC
CCCGAGCTGG CGCGGCGCCT CTCCGAGGCC GGCTTCGCGA TCGGCAACCA CACCTGGGAG
CACACCGACC TGACCGGGCA GACCGGCGGC CAGATCCGCC GCGCGCTGCA GCGGACCCGG
CACGCCCTGA TCGAGGCGGG CGTGCCGGCG CCGACGCTCG TCCGGCCGCC GTACGGCGCC
GTCGACGGCC GGGTCCGGCG GGTGCTCGCG GCCGTCGGCT ACACACCGGT GCTCTGGACC
ATCGACTCGC GCGACTGGTC GGGCGGCACC CCGCGGCAGA TCGCCAGACG CGTGCTCACC
GCGGTGCGCC CGCACCGGAC GAACATCGTG CTCCAGCACG ACGGCGTCAC CCACTCCCCC
GCCACACTCC GGGCGATCCC TCGTGAGGTG CAGGCGTTGC GCGAGCGCGG CTTCTGCTTC
GCCGCCCTCG GCCCCGACGG CCGACCGACG CCCCCGGTCC CGGTCGCCAG CGTGTCCGCG
GACCGGCCGC GGGTCACCGA GGGCGGCCGC GTGCGGCTCA CCGTCCGCCT CGACCGGCCG
ACCAGCCGGG AGACGACGGC GCTCGTCGCG GCGGGTGGCT CGGCGAGCGG AACGGACTTC
GAGATGACGA CGCGCCGGGT CCGCTTCGGC GTCGGTGACC AGGTCGCCCA TCTGTGGCTG
CGGACCCGCC AGGACGACAT CGACGAGGTC CGTGAGGAGG TGGATCTCAA GGTGTTCGGA
GGCCGCGGGG TCCAGCCCGC GCTGGTCTGG CAGGCCGGGG TGTCCATCGC CGACGACGAT
CCGCCGCCGG TGGCGCGCCT CGTCGATGCC ACGGTCACTG CTGCACCCCT GCTCGCCACC
GGTGCGAGCG TGCGGGTCCG CCTCGACCGG GCCAGTGGCC GTCCGGTGCG GGTGCAGGTG
CGCTCGCCGC TCGGTCGCGG TGGCGTCGTC GTCGCAGCCG GCAGCCGGAC CGCGACCCTG
ACCCTCACCG TCCCGCCCGG CGCCCCACGC GACGGGGTCC ACGACCTGCC CGTGCGGATC
GTGGGGGCCA CCCACGCGAG GGCGGGGGCC GGCGCGGTGC TCACGGTGCG TCCGCCCCGC
CAGAGCCGCG CCGAGGCGAT CGCCGCCGCC GTGGCCGCCG TCCGCTGGCC GGTGGCCACC
GTGCCTCGCA TCTTCTAG
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| Protein sequence | MRRIPVLVVV LVLVALLLGG VPAVAAPGGD RPIGPCSRGL VALTFDDGPS TAVTPRLAHR
LDRLGVPATF FVVGTRVAAH PELARRLSEA GFAIGNHTWE HTDLTGQTGG QIRRALQRTR
HALIEAGVPA PTLVRPPYGA VDGRVRRVLA AVGYTPVLWT IDSRDWSGGT PRQIARRVLT
AVRPHRTNIV LQHDGVTHSP ATLRAIPREV QALRERGFCF AALGPDGRPT PPVPVASVSA
DRPRVTEGGR VRLTVRLDRP TSRETTALVA AGGSASGTDF EMTTRRVRFG VGDQVAHLWL
RTRQDDIDEV REEVDLKVFG GRGVQPALVW QAGVSIADDD PPPVARLVDA TVTAAPLLAT
GASVRVRLDR ASGRPVRVQV RSPLGRGGVV VAAGSRTATL TLTVPPGAPR DGVHDLPVRI
VGATHARAGA GAVLTVRPPR QSRAEAIAAA VAAVRWPVAT VPRIF
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