| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3204 |
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| Symbol | |
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| ID | 4599067 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 3403750 |
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| End bp | 3404868 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639777810 |
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| Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| Protein accession | YP_924393 |
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| Protein GI | 119717428 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.353333 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCAGGC CGGTCAGAGA CGTCGCGATC CTCGGCAGCA CCGGGTCGAT CGGCACCCAG
GCGCTCGATC TCGTGCGGGC CAACCCGGAC CGGTTCCGGG TCGTGGCGTT GACCGCCGGC
GGCTCGAGCC CCGAGCTGTT CGAGCGCCAG GTGGCCGAGT TCGCCCCGGC GTACCCCGAC
CTCTTCTCCG GGCTGGGCGA GGAGGCCTCG GTCGAGGCGG CCACCCGGCC GTGCGACGTC
GTCCTCAACG GCATCACCGG CGCGGTCGGG CTGCGCCCGA CCCTGGCCGC CCTCGACGCC
GGGCACACGC TCGCGTTGGC CAACAAGGAG TCGCTGATCA TGGGTGGCCC CCTGGTGCTC
GAGCGTGCGA AGCCGGGCCA GATCGTGCCG GTCGACTCCG AGCACAGCGC GATCGCCCAG
TGCCTGCGTG GCGGCCGTGC CGACGAGGTA CGCCGGCTGG TGCTGACCGC GAGCGGCGGC
CCGTTCCGCG GCCGCACCCG CGAGGAGCTG GCCGACGTGA CGCCCGCGCA GGCCATGGCG
CACCCGACCT GGGACATGGG CCCGGTGATC ACCATCAACT CGGCGACCCT GGTCAACAAG
GGGTTGGAGG TGATCGAGGC GCACCTGCTG TTCGGCATCC CCTTCGACCG GATCGAGGTC
GTGGTGCACC CGACCAGCGT CGTGCACTCG ATGGTCGAGT TCGTCGACGG CTCGACGCTG
GTGCAGGCCA GCCCGCCGAC CATGCTGATC CCGATCGCGC TCGGCCTGTC CTGGCCGGAC
CGGGTGCCGG ACGCCGCGCC CCCGGTCGAC TGGAGCCGGC CGGAGACCTG GGAGTTCTTC
CCGCTCGACG ACGCGGCGTT CCCGGCCGTG GCGCTGGCCC GCGAGGCGGG GCAGCGCGGC
GGGACCGCCC CGGCGGTCTA CAACGCCGCC AACGAGGTCG CCGTCGACGC CTTCCGCACG
GGCGCGCTGG CGTTCACCGA GATCGTGCCC ACGGTTCAGG CCGTTCTCAG CCGGCACGAC
GTACCCTCGG AGGTGACGAT CGAGGACATC CTCGCCGCCG ACGCCTGGGC CCGCGAGGCC
ACCCGCACCC GCCTCCGGCC CGACCAGATC GAGGACTGA
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| Protein sequence | MSRPVRDVAI LGSTGSIGTQ ALDLVRANPD RFRVVALTAG GSSPELFERQ VAEFAPAYPD
LFSGLGEEAS VEAATRPCDV VLNGITGAVG LRPTLAALDA GHTLALANKE SLIMGGPLVL
ERAKPGQIVP VDSEHSAIAQ CLRGGRADEV RRLVLTASGG PFRGRTREEL ADVTPAQAMA
HPTWDMGPVI TINSATLVNK GLEVIEAHLL FGIPFDRIEV VVHPTSVVHS MVEFVDGSTL
VQASPPTMLI PIALGLSWPD RVPDAAPPVD WSRPETWEFF PLDDAAFPAV ALAREAGQRG
GTAPAVYNAA NEVAVDAFRT GALAFTEIVP TVQAVLSRHD VPSEVTIEDI LAADAWAREA
TRTRLRPDQI ED
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