| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3202 |
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| Symbol | ispG |
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| ID | 4599065 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 3401198 |
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| End bp | 3402361 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639777808 |
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| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
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| Protein accession | YP_924391 |
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| Protein GI | 119717426 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
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| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACCC CCGCGTCCGC CGTCAGCCTC GGCCTGCCCG AAGCGCCCCC GCCGGTGCTC
GCGCCGCGCC GCAAGACCCG CCAGATCCGG GTCGGCAAGG TCGGCGTCGG CAGCGACTAC
CCGGTCTCGG TCCAGTCGAT GACGACCACG CAGACCTCGG ACGTCAACAG CACCCTGCAG
CAGATCGCCG AGCTCACCGC GACCGGGTGC GACATCGTCC GGGTGGCGTG CCCCAGCCAG
GACGACGCCG ACGCGCTGCC GGCGATCGCG CAGAAGTCGC AGATCCCGGT GATCGCCGAC
ATCCACTTCC AGCCGAAGTA CGTGTTCGCC GCGATCGACG CCGGCTGCGC GGCGGTCCGC
GTCAACCCCG GCAACATCCG CAAGTTCGAC GACCAGGTCA AGGAGATCGC CCGCGCGGCC
AAGGACCGCG GCACCTCCAT CCGGATCGGC GTCAACGCCG GCTCCCTGGA CAAGCGGCTG
CTCGAGAAGT ACGGCAAGGC CACGCCCGAG GCGCTGGTCG AGTCCGCGGT GTGGGAGGCC
AGCCTGTTCG AGGAGCACGA CTTCCACGAC TTCAAGATCT CGGTCAAGCA CAACGACCCC
GTCGTGATGG TGCGCGCCTA CGAGATGCTC GCCGAGCGCG GGGACTGGCC GCTCCACCTC
GGCGTCACCG AGGCGGGGCC GGCGTTCCAG GGCACGATCA AGTCGGCCAC GGCCTTCGGC
GCCCTTCTCT CGCAGGGCAT CGGCGACACG ATCCGGGTCT CGCTGTCCGC GCCGCCGGTC
GAGGAGGTCA AGGTCGGCAT CCAGATCCTC CAGTCGCTCA ACCTCCGGCC CCGCAAGCTC
GAGATCGTGT CCTGCCCGTC CTGCGGTCGC GCCCAGGTCG ACGTCTACAC GCTGGCCGAG
CAGGTGACTG CCGGCCTCGA GGGGCTCGAG GTGCCGTTGC GGGTGGCCGT CATGGGCTGC
GTCGTCAACG GACCGGGGGA GGCCCGCGAG GCCGACCTCG GCGTCGCCTC CGGCAACGGG
AAGGGCCAGA TCTTCGTCAG GGGCGAGGTC ATCAAGACCG TGCCGGAGTC GAAGATCGTG
GAGACCCTGA TCGAGGAGGC CATGCGGATC GCGGAGGGCA TGGAGTCGGT GGACGGCGCC
GGCGCCTCGG TCACCGTCAG CTGA
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| Protein sequence | MSTPASAVSL GLPEAPPPVL APRRKTRQIR VGKVGVGSDY PVSVQSMTTT QTSDVNSTLQ
QIAELTATGC DIVRVACPSQ DDADALPAIA QKSQIPVIAD IHFQPKYVFA AIDAGCAAVR
VNPGNIRKFD DQVKEIARAA KDRGTSIRIG VNAGSLDKRL LEKYGKATPE ALVESAVWEA
SLFEEHDFHD FKISVKHNDP VVMVRAYEML AERGDWPLHL GVTEAGPAFQ GTIKSATAFG
ALLSQGIGDT IRVSLSAPPV EEVKVGIQIL QSLNLRPRKL EIVSCPSCGR AQVDVYTLAE
QVTAGLEGLE VPLRVAVMGC VVNGPGEARE ADLGVASGNG KGQIFVRGEV IKTVPESKIV
ETLIEEAMRI AEGMESVDGA GASVTVS
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