Gene Noca_3189 details

Gene Information

• Locus tag: Noca_3189
• Symbol: rbfA
• ID: 4599052
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nocardioides sp. JS614
• Kingdom: Bacteria
• Replicon accession: NC_008699
• Strand: -
• Start bp: 3387860
• End bp: 3388348
• Gene Length: 489 bp
• Protein Length: 162 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 639777795
• Product: ribosome-binding factor A
• Protein accession: YP_924378
• Protein GI: 119717413
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0858] Ribosome-binding factor A
• TIGRFAM ID: [TIGR00082] ribosome-binding factor A

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.0454193
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCAACC CACGCATCCG CAAGATCGCC GACCGGATCC AGGTGGTCGT CGCGGAGATG 
CTGGAGCGAC GGATCAAGGA CCCGCGGCTC GGGTTCGTGA CCGTCACCGA CGTCCGGGTC 
TCGGGGGACA GCCAGCAGGC CACGATCTTC TACACGGTCC TCGGAGAGGA CGACGAGGCG 
GCCCGTACGG CCAGCGCGGT CGCGCTGGAG TCGGCCAAGG GCCTGCTGCG CTCCGAGGTC 
GCCAAGCAGC TCGGGATGCG GCACGCGCCG ACCCTGGAGT TCGTGCACGA CGCGCTGCCT 
GAGAGCGCCC GCCAGCTCGA CGAGGTGCTG GCCCGCGCGA AGGCGCAGGA CGAGGCGCTG 
GCAGCCGGGC GCGGCACGGC GTACGCCGGC GAGGCCGACC CCTACAAGAA GCCGCGTCCG 
GCCGACGCCG ACGAGCCCGA CGACTCCGGC GAACCCGGCG AGTTCGACGG GGTCGATGAC 
GACGAGTGA 

 

Protein sequence

MSNPRIRKIA DRIQVVVAEM LERRIKDPRL GFVTVTDVRV SGDSQQATIF YTVLGEDDEA 
ARTASAVALE SAKGLLRSEV AKQLGMRHAP TLEFVHDALP ESARQLDEVL ARAKAQDEAL 
AAGRGTAYAG EADPYKKPRP ADADEPDDSG EPGEFDGVDD DE