| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3188 |
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| Symbol | truB |
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| ID | 4599051 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 3387004 |
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| End bp | 3387873 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 639777794 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_924377 |
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| Protein GI | 119717412 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0863622 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGACGA GTGAGGCCGG GCTGGTCGTC GTCGACAAGC CCGGCGGCCT GACCTCGCAC
GACGTCGTCT CGCGGGTGCG GCGCCTGACC GGCACCCGCA AGGTCGGGCA CGCGGGCACC
CTCGACCCGA TGGCCACCGG GGTCCTCGTG CTCGGGATCA ACCGGGCGAC CCGGCTGCTC
GGGCACCTGA TGCTGACCGA GAAGGCGTAC GACGCCACCA TCCGGCTCGG TGTCGCCACG
AGCACCGACG ACGCCGAGGG CGAGGTGACC GCGACCGCGT CGGCCGCGGG CCTGGACGAG
GCGACCGTCC GAGCGGCGGC CGCCGAGTTC GTGGGCGACC TGCTGCAGGT GCCGACCGCG
GTGTCGGCGA TCAAGGTCGA CGGCAAGCGC GCCTACCAGC GGGTCCGGGC GGGCGAGGAG
GTCGCGCTGG AGGCCCGCCC GGTCACGGTC CACGAACTGG TGGTCCACGA GGTCCGACCG
GCCGGCGACA CCTGCGACCT CGACGTCGCG GTGCGCTGCT CGAGCGGCAC CTACGTGCGC
GCGATCGCCC GCGACCTCGG CGCCCGCCTC GGCGTGGGCG GCCACCTGAC GGCGCTGCGT
CGTACCGCCG TCGGCCCCTA CGGGCTGGAC GTGGCGCACA CCCTGGACGA ACTCGGCGAG
GAGCTCGTGG TGCTGCCGGT CGCGGCGGCT GCGCGGGCGG CGTTCGCGAG CCGCGACCTC
GATGACGCCC AGGCCACCGA CGTCCGCTTC GGGCGGGCGC TGGACCTCGA CCTCCCGGGC
CTGACCGCCG TGTTCGCCCC GGACGGGGAG TTCCTCGCGC TCTACGAGCC GCGCGGCGGC
GCGGCCAAGG CCGTCGCGGT CTTCGTGTGA
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| Protein sequence | MTTSEAGLVV VDKPGGLTSH DVVSRVRRLT GTRKVGHAGT LDPMATGVLV LGINRATRLL
GHLMLTEKAY DATIRLGVAT STDDAEGEVT ATASAAGLDE ATVRAAAAEF VGDLLQVPTA
VSAIKVDGKR AYQRVRAGEE VALEARPVTV HELVVHEVRP AGDTCDLDVA VRCSSGTYVR
AIARDLGARL GVGGHLTALR RTAVGPYGLD VAHTLDELGE ELVVLPVAAA ARAAFASRDL
DDAQATDVRF GRALDLDLPG LTAVFAPDGE FLALYEPRGG AAKAVAVFV
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