| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3177 |
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| Symbol | |
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| ID | 4599040 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 3375064 |
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| End bp | 3377292 |
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| Gene Length | 2229 bp |
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| Protein Length | 742 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639777783 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_924366 |
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| Protein GI | 119717401 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR02696] guanosine pentaphosphate synthetase I/polynucleotide phosphorylase
[TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACCGACC CCGAGATCTC TGCCGTCGAG ACCGTTCTGG ACAACGGCAA GTTCGGCACC
CGCACCGTCA AGTTCGAGAC CGGCCTACTG GCCCGGCAGG CTGCCGGCGC CGTGACCGCC
TACCTCGACG AGGACACCAT GCTCCTGTCG GCCACCACGG CCGGCAAGCA CCCGAAGGAC
CACTTCGACT TCTTCCCGCT CACCATCGAC GTCGAGGAGC GGATGTACGC CGCGGGCAAG
ATCCCCGGCT CGTTCTTCCG CAGCGAGGGC CGTCCGGGCG AGGACGCGAT CCTCACCTGC
CGCCTCATCG ACCGGCCGCT GCGCCCGACC TTCAAGAAGG GCCTGCGCAA CGAGGTCCAG
GTCGTCATCA CCGTGATGGC GCTCAACCCC GACACGCCGT ACGACGTGCT CGCGATCAAC
GCCGCCTCGC TCTCCACCCA GCTCTCGGGC CTGCCGTTCT CCGGCCCCGT CGGCGGCGTC
CGCGTGGCGC TGATCGAGGG CCAGTGGGTC GCCTTCCCGA CCCACAGCCA GCTCGAGAAC
GCCGTGTTCG ACATGGTGGT CGCCGGACGC GTCACCGAGA CCGGTGACGT CGCGATCATG
ATGGTCGAGG CCGAGGCCAC CGAGCAGACC TGGGACCTGG TCCGCTCCGG CACCCAGGCG
CCGACCGAGG AGATCGTGGC CGGCGGTCTC GACGCCGCCA AGCCGTTCAT CAAGCAGCTC
TGCGAGGCGC AGGTCGAGCT GGCGAACGTC GCGGCGAAGC CGGTCCAGGA CTTCCCCGTC
TTCCTCGACT ACGAGGACGA CGTGTACGAC GCGGTCGAAG CGGCCGTGAA GGCCGAGCTG
GCCGCGGCGA TGAAGATCGC CGACAAGCAG GAGCGCAACG ACCGCACCGA CGAGCTCAAG
GACGAGGTCC TGGCCAAGCT CGGCGAGCAG TTCGAGGGCC GTGAGAAGGA GATCGGCGCG
GCGTTCCGCT CGGTCAACAA GCAGGTCGTC CGGGAGAGCA TCCTGCGCGA CAAGGTCCGC
ATCGACGGCC GCGGCCTGGC CGACATCCGG CCGCTGCACG CCGAGGTCGG CGTGATTCCG
CGGGTGCACG GCTCGGCGCT GTTCGAGCGT GGGGAGACCC AGATCCTGGG CGTCACGACG
CTGGACATGC TCAAGATGGA GCAGCAGCTC GACACGCTCT CGCCGGAGAA GCACCGCCGT
TACATGCACA AGTACGTCTT CCCGCCGTTC TCCACCGGCG AGACCGGCCG GGTCGGCTCG
CCGAAGCGCC GCGAGGTCGG CCACGGCGCG CTGGCGCGCC GGGCGCTGCT GCCGGTGCTG
CCCACGCGCG AGGAGTTCCC CTACGCGATC CGCCAGCTCT CCGAGGCGAT GGGCTCCAAC
GGCTCGACCT CGATGGGCTC GGTCTGCGCG TCCACGCTCG CACTGCTCCA GGCCGGTGTG
CCGCTGAAGG CCCCGGTCGC CGGCATCGCG ATGGGCCTGG TCTCCGGCGA GATCGACGGC
CAGCTCCAGT ACGTCGCCCT CACCGACATC CTCGGTGCCG AGGACGCGTT CGGCGACATG
GACTTCAAGG TCGCCGGCAC CCGCGAGTTC GTCACCGCGC TGCAGCTGGA CACCAAGCTC
GACGGCATCC CGGCCGAGGT CCTCGCCCAG GCGCTGACCC AGGCGCGCGA CGCCCGCCTG
ACCATCCTCG ACGTGATGGC CGAGGCCATC GACGAGCCCG AGGAGATGTC GGCGTACGCC
CCGCGGATCA TCACGATCAC GATCCCGGTC GACAAGATCG GCGAGGTGAT CGGCCCCAAG
GGCAAGATCA TCAACCAGAT CCAGGACGAC ACCGGCGCGT CGATCTCGAT CGAGGACGAC
GGCACGATCT ACATCGGTGC GACCAACGGC GAGGCGGCCG AGGCGGCCAA GAACGCCGTC
AACGCGATCG CCAACCCGAC CATGCCCGAG GTCGGCGAGC GCTACCTCGG CACGGTCGTC
AAGACGACCA ACTTCGGCGC GTTCGTCTCG CTGATGCCCG GCAAGGACGG CCTGCTGCAC
ATCAGCAAGC TCCGCTCGCT GGCCGGCGGC AAGCGGGTCG ACGCGGTCGA GGACGTCGTC
TCGGTCGGCC AGAAGATCCA GGTCCAGATC GCCGAGATCG ACGACCGCGG GAAGCTGTCG
CTGGTCCCGG TCGTCGAGGG CGACCAGGCC GACTCCGACA CCGCCGAGGC CGGCTCCGAG
GAGGAGTGA
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| Protein sequence | MTDPEISAVE TVLDNGKFGT RTVKFETGLL ARQAAGAVTA YLDEDTMLLS ATTAGKHPKD
HFDFFPLTID VEERMYAAGK IPGSFFRSEG RPGEDAILTC RLIDRPLRPT FKKGLRNEVQ
VVITVMALNP DTPYDVLAIN AASLSTQLSG LPFSGPVGGV RVALIEGQWV AFPTHSQLEN
AVFDMVVAGR VTETGDVAIM MVEAEATEQT WDLVRSGTQA PTEEIVAGGL DAAKPFIKQL
CEAQVELANV AAKPVQDFPV FLDYEDDVYD AVEAAVKAEL AAAMKIADKQ ERNDRTDELK
DEVLAKLGEQ FEGREKEIGA AFRSVNKQVV RESILRDKVR IDGRGLADIR PLHAEVGVIP
RVHGSALFER GETQILGVTT LDMLKMEQQL DTLSPEKHRR YMHKYVFPPF STGETGRVGS
PKRREVGHGA LARRALLPVL PTREEFPYAI RQLSEAMGSN GSTSMGSVCA STLALLQAGV
PLKAPVAGIA MGLVSGEIDG QLQYVALTDI LGAEDAFGDM DFKVAGTREF VTALQLDTKL
DGIPAEVLAQ ALTQARDARL TILDVMAEAI DEPEEMSAYA PRIITITIPV DKIGEVIGPK
GKIINQIQDD TGASISIEDD GTIYIGATNG EAAEAAKNAV NAIANPTMPE VGERYLGTVV
KTTNFGAFVS LMPGKDGLLH ISKLRSLAGG KRVDAVEDVV SVGQKIQVQI AEIDDRGKLS
LVPVVEGDQA DSDTAEAGSE EE
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