Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_3172 |
Symbol | |
ID | 4600157 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 3370302 |
End bp | 3371180 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639777778 |
Product | sigma-70 region 2 domain-containing protein |
Protein accession | YP_924361 |
Protein GI | 119717396 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family [TIGR02957] RNA polymerase sigma-70 factor, TIGR02957 family |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGAGG ACCCCTTCGT CGCTCACCGC AGCCTGCTGT TCACCGTCGC CTACGAGATG CTCGGGTCGG TCGCCGACGC CGAGGACGTG GTGCAGGAGA CCTGGCTGCG CTGGGCAGCC CTGCCCGCCG CCGACCGTGG TGAGGTCCGA GATCCCCGTG CCTACCTCGT GCGGATCGTC ACCCGGCTCT CCCTCAACCG GCTGCGTACG CTCACCCGGC TGCGGGAGGA GTACGTCGGC GAGTGGCTCC CCGAGCCGCT GCTCACCAGC CCCGACGTCG CCGAGGACGT CGAGCTCGCG GAGAGCGTGT CGATCGCCAT GCTCGCGGTC CTCGAGACAC TGCTGCCGAC CGAGCGTGCG GTCTTCGTGC TCCGGGAGGT CTTCGACGTG CCCTACGACG AGATCGCGGC GGCGTTGGAC AAGTCCTCCG CTGCGGTGCG CCAGATCGCG TCCCGGGCCC GCAAGTACGT GGCGGCCCGC CGGCCCCGGA CCTCGGTGAG CCGTGCGGAG CAGGAGCGGG TGGTCGAGCG GTTCCTCGCC GCCCTGACGA CCGGCGACGT CGTGGGACTG CTCGACGTGC TCGCTCCGGA CGTGCTCCTC GTGGGCGACG GCGGCGGCCT GGTCCCGACC GTCCCGAGTC CCGTGCGCGG GGCGGCCCGG CTCGCCCCGG TGATGGCCCG CTTCGCCGAG CTCGCGCCCG GCACGACGGC CGTCATCGTC GACCTCAACG GCGGCATCGC GGCGCGCATC GATCCCGGCG GCCAGAACGA CACGGCCGTC TCGTTCGTCA TCGAGGGCCA CCGGATCGCG CAGATCTACG CGATCCGCAA CCCCCACAAG CTCCAGCGCC TGGCAGAGGT GGCCGAGCTC CGACGGTGA
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Protein sequence | MSEDPFVAHR SLLFTVAYEM LGSVADAEDV VQETWLRWAA LPAADRGEVR DPRAYLVRIV TRLSLNRLRT LTRLREEYVG EWLPEPLLTS PDVAEDVELA ESVSIAMLAV LETLLPTERA VFVLREVFDV PYDEIAAALD KSSAAVRQIA SRARKYVAAR RPRTSVSRAE QERVVERFLA ALTTGDVVGL LDVLAPDVLL VGDGGGLVPT VPSPVRGAAR LAPVMARFAE LAPGTTAVIV DLNGGIAARI DPGGQNDTAV SFVIEGHRIA QIYAIRNPHK LQRLAEVAEL RR
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