| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3172 |
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| Symbol | |
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| ID | 4600157 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 3370302 |
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| End bp | 3371180 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639777778 |
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| Product | sigma-70 region 2 domain-containing protein |
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| Protein accession | YP_924361 |
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| Protein GI | 119717396 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02957] RNA polymerase sigma-70 factor, TIGR02957 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAGG ACCCCTTCGT CGCTCACCGC AGCCTGCTGT TCACCGTCGC CTACGAGATG
CTCGGGTCGG TCGCCGACGC CGAGGACGTG GTGCAGGAGA CCTGGCTGCG CTGGGCAGCC
CTGCCCGCCG CCGACCGTGG TGAGGTCCGA GATCCCCGTG CCTACCTCGT GCGGATCGTC
ACCCGGCTCT CCCTCAACCG GCTGCGTACG CTCACCCGGC TGCGGGAGGA GTACGTCGGC
GAGTGGCTCC CCGAGCCGCT GCTCACCAGC CCCGACGTCG CCGAGGACGT CGAGCTCGCG
GAGAGCGTGT CGATCGCCAT GCTCGCGGTC CTCGAGACAC TGCTGCCGAC CGAGCGTGCG
GTCTTCGTGC TCCGGGAGGT CTTCGACGTG CCCTACGACG AGATCGCGGC GGCGTTGGAC
AAGTCCTCCG CTGCGGTGCG CCAGATCGCG TCCCGGGCCC GCAAGTACGT GGCGGCCCGC
CGGCCCCGGA CCTCGGTGAG CCGTGCGGAG CAGGAGCGGG TGGTCGAGCG GTTCCTCGCC
GCCCTGACGA CCGGCGACGT CGTGGGACTG CTCGACGTGC TCGCTCCGGA CGTGCTCCTC
GTGGGCGACG GCGGCGGCCT GGTCCCGACC GTCCCGAGTC CCGTGCGCGG GGCGGCCCGG
CTCGCCCCGG TGATGGCCCG CTTCGCCGAG CTCGCGCCCG GCACGACGGC CGTCATCGTC
GACCTCAACG GCGGCATCGC GGCGCGCATC GATCCCGGCG GCCAGAACGA CACGGCCGTC
TCGTTCGTCA TCGAGGGCCA CCGGATCGCG CAGATCTACG CGATCCGCAA CCCCCACAAG
CTCCAGCGCC TGGCAGAGGT GGCCGAGCTC CGACGGTGA
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| Protein sequence | MSEDPFVAHR SLLFTVAYEM LGSVADAEDV VQETWLRWAA LPAADRGEVR DPRAYLVRIV
TRLSLNRLRT LTRLREEYVG EWLPEPLLTS PDVAEDVELA ESVSIAMLAV LETLLPTERA
VFVLREVFDV PYDEIAAALD KSSAAVRQIA SRARKYVAAR RPRTSVSRAE QERVVERFLA
ALTTGDVVGL LDVLAPDVLL VGDGGGLVPT VPSPVRGAAR LAPVMARFAE LAPGTTAVIV
DLNGGIAARI DPGGQNDTAV SFVIEGHRIA QIYAIRNPHK LQRLAEVAEL RR
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