Gene Noca_3171 details

Gene Information

• Locus tag: Noca_3171
• ID: 4600156
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nocardioides sp. JS614
• Kingdom: Bacteria
• Replicon accession: NC_008699
• Strand: +
• Start bp: 3369700
• End bp: 3370305
• Gene Length: 606 bp
• Protein Length: 201 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 639777777
• Product: carboxymuconolactone decarboxylase
• Protein accession: YP_924360
• Protein GI: 119717395
• COG category: [S] Function unknown
• COG ID: [COG2128] Uncharacterized conserved protein
• TIGRFAM ID: [TIGR00778] alkylhydroperoxidase AhpD family core domain

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCACGA CAACCACGGA CCACGCGACC CGCATCCCCC CGGCCGAGAT CACCGGCCTC 
AAGGGTGCCC TGATCAAGCG GATGATCGAG AAGAAGCTCG GCAAGGTCCC GACCGCGGTC 
GGGATCTACT GGCACAACCC CAAGGTGCTG TTCGCCACCT TCGGCCTCGG AGGCAAGCTG 
CAGAAGTGGG ACGCCTGCGA CGAGGGCCTG AAGTCCTTCG CCCACATGGC GGTCGCGTCG 
CTCGTCGGCT GCACGTGGTG CCTGGACTTC AACTACTTCG AGGCACACAA CTCGGGACTG 
GACGTCGAGA AGGCGCGCCA GATCCCGCGG TGGCGCGAGA CGGACGTCTT CACGTCGCTC 
GAGCGCGACG TCCTGGAGTA CGCCGAGGCG ATGAGCCAGA CGCCGCCCAC GGTCACCGAC 
GAACTCGTGG ACCGGCTGCA CGCCGAGCTG GGTGCCGCCG CGGTCGTGGA GCTCACGTCG 
GTGATCTCGT TCGCGAACAT GACCACGCGC GGCAACATCG CGCTCGGCAT CGAGTCGGAC 
GGGTTCGCCG CGGCGTGCGG CCTGAAGCCC CTCGCCGAGC GACCGCACGT AGCCTCTGCC 
TCATGA 

 

Protein sequence

MTTTTTDHAT RIPPAEITGL KGALIKRMIE KKLGKVPTAV GIYWHNPKVL FATFGLGGKL 
QKWDACDEGL KSFAHMAVAS LVGCTWCLDF NYFEAHNSGL DVEKARQIPR WRETDVFTSL 
ERDVLEYAEA MSQTPPTVTD ELVDRLHAEL GAAAVVELTS VISFANMTTR GNIALGIESD 
GFAAACGLKP LAERPHVASA S