| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3167 |
|---|
| Symbol | |
|---|
| ID | 4600152 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | - |
|---|
| Start bp | 3367087 |
|---|
| End bp | 3367830 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639777773 |
|---|
| Product | dihydrodipicolinate reductase |
|---|
| Protein accession | YP_924356 |
|---|
| Protein GI | 119717391 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0289] Dihydrodipicolinate reductase |
|---|
| TIGRFAM ID | [TIGR00036] dihydrodipicolinate reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGTGG GTGTGCTCGG CGCGCGCGGC AAGGTCGGCT CCGAGGTCTG CCGTGCGGTC
GACGCCGCCG ACGACCTGGA GCTGGTCGCG CAGGTCGACG CCGATGACGA GATCGACGCG
CTGGTGACCT CCGGCGCCCA GGCGGTCGTC GACTTCACCC ATCCCGACGT CGTCATGGAC
AACCTCGAGT TCTGCGTCGA CCACGGGATC CACGCCGTGG TCGGCACGAC CGGGTTCGAC
GACGCCCGAC TCGACCTGCT GCGTGGCTGG CTCGCCGACT CCCCGGGGAC CGGTGTCCTG
GTCGCGCCCA ACTTCTCGAT CGGCGCGATC TTGATGATGC GCTTCGCCGC GGTCGCGGCG
CCGTTCTTCG AGTCGGTCGA GGTCGTCGAG CTGCACCACC CGACGAAGGC CGACGCGCCG
TCCGGCACGG CACGTCGTAC GGCGGAGCTG ATCGCGGCAG CGCGCCGCGA GGCCGGTGTC
GGGCCGGTGC CTGACGCCAC CACCACGGCG CTCGAGGGCG CGCGCGGCGC GGACGTCGAC
GGGATCCGCG TCCACGGTCT GCGGATCCGC GGCCTGGTCG CCCACCAGGA GGTGATCCTC
GGTGGGGTGG GGGAGACCCT CACCATCCGG CACGACTCCC TGGATCGGGC CTCGTTCGCC
CCCGGCGTGC TCACCGGGCT GCGCTCGATC GCCGACCACC CGGGGCTCAC GGTCGGACTG
GAACACTTCC TCGACCTGGA CTGA
|
|---|
| Protein sequence | MKVGVLGARG KVGSEVCRAV DAADDLELVA QVDADDEIDA LVTSGAQAVV DFTHPDVVMD
NLEFCVDHGI HAVVGTTGFD DARLDLLRGW LADSPGTGVL VAPNFSIGAI LMMRFAAVAA
PFFESVEVVE LHHPTKADAP SGTARRTAEL IAAARREAGV GPVPDATTTA LEGARGADVD
GIRVHGLRIR GLVAHQEVIL GGVGETLTIR HDSLDRASFA PGVLTGLRSI ADHPGLTVGL
EHFLDLD
|
|---|
| |