Gene Noca_3141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_3141 
Symbol 
ID4595571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp3344177 
End bp3345151 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content67% 
IMG OID639777747 
Productcytochrome c oxidase, subunit II 
Protein accessionYP_924330 
Protein GI119717365 
COG category[C] Energy production and conversion 
COG ID[COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2 
TIGRFAM ID[TIGR02866] cytochrome c oxidase, subunit II 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTCGGCT TATCCGTGTT CGTTGAGAGA GAGGCTCAGG TGTTGAGTCT GCAACTCCCC 
AAGCGCGCCG CCGGCAGCCG CGGGACCGCC CGTCGGGTGG CCGCCCTGGC AGCGATCGGC
GTGGGCGTCC TGGTCCTCGG TGGCTGCTCG TCCGAGACCC AGGGCGAGTG GAAGCGATTG
GCGATGCCCG ACCCGGCGTC GGAGCAGGGC GAGCAGGTGC TCAACCTGTG GCAGGGCGCC
TGGATCGCGG CGCTCGTGAC CGGTGTCATC GTGTGGGGCC TGATCTTCTA CGCGATCTGG
CGGTTCCGCC GGCGCAGCGA GGACGAGATC CCCGTCCAGA CCCGCTACAA CCTGCCGCTC
GAGATCTTCT ACACGATCGC GCCGATCATC ATGGTGATCG TCTTCTTCGC GCACACGGTC
AAGGTCCAGA ACGCCATCCT CGACGACGAC CTCCCGGTCG ACAACACGAT CGAGGTCGTC
GGCCAGCAGT GGTCGTGGAC CTTCAACTAC GGCATCGGTG AGCAGGACGC GTCGGCCAAC
GACGACGCGA CCGACGACGT CTTCGCGTAC TCCTCCTACG TCCACGAGGC CGGCACCGGC
TCCTACATCC CGACCCTGGT GCTGCCGGTG GGGGAGACCA CCCGCTTCAA CCTCCACTCC
CCGGACGTGA TCCACGACCT GAGCGTCCCG GCGTTCCTGC TGAAGATGGA CGTGGTCCCG
GGCCGGGTGA ACCACTACGA GATCACCCCG ACCCGGATCG GCGAGTACGC CGGCAAGTGC
TTCGAGCTCT GCGGCGTCTA CCACTCGCGG ATGCTCTTCA ACGTCAAGGT CGTCAGCGCC
GACGACTACC AGACCTACCT CCAGCAGCTC CAGGACGCCG GTGCGACGTC GCAGGCGCCG
CTGCTGGGCG GCGAGTACGC CAGCACGCAG GCCGGACTCG ACTCCGGCGA CCAGTCCGAG
GAGGGCGCGG AGTGA
 
Protein sequence
MFGLSVFVER EAQVLSLQLP KRAAGSRGTA RRVAALAAIG VGVLVLGGCS SETQGEWKRL 
AMPDPASEQG EQVLNLWQGA WIAALVTGVI VWGLIFYAIW RFRRRSEDEI PVQTRYNLPL
EIFYTIAPII MVIVFFAHTV KVQNAILDDD LPVDNTIEVV GQQWSWTFNY GIGEQDASAN
DDATDDVFAY SSYVHEAGTG SYIPTLVLPV GETTRFNLHS PDVIHDLSVP AFLLKMDVVP
GRVNHYEITP TRIGEYAGKC FELCGVYHSR MLFNVKVVSA DDYQTYLQQL QDAGATSQAP
LLGGEYASTQ AGLDSGDQSE EGAE