| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3140 |
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| Symbol | |
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| ID | 4595570 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 3342432 |
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| End bp | 3344180 |
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| Gene Length | 1749 bp |
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| Protein Length | 582 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639777746 |
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| Product | cytochrome-c oxidase |
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| Protein accession | YP_924329 |
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| Protein GI | 119717364 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCGCCA CCGCTGCACC GTCGACCACC ATCACGGCAC GCCCGCCGCT GGGTCAGCAG
CTCGCGCGCA TCATGACGAC GACCGATCAC AAGGTGATCG GCAAGCTCTA CCTGGGCACG
TCGTTCGCCT GGTTCCTGAT CGGCGGCCTG ATGGCCATGC TGATCCGCTC GGAGCTGGCC
TACCCGGGCA TGCAGGTCGT GAACGACGAG GTCTACAACC AGCTGTTCAC GATGCACGGC
ACGATCATGC TGCTGCTGTT CGCGACGCCG CTGTTCTTCG GCTTCGCCAA CGTGATCATG
CCGTTGCAGA TCGGCTCGCC CGACGTCGCC TTCCCGCGCC TGAACATGCT CAGCTACTGG
CTGTTCCTGT TCGGCGGCCT GATCGCCGCG TCCGGCTTCC TCACGCCCTC CGGCGCGGCC
GACTTCGGCT GGTTCGCCTA CACCCCGCTC TCCGACGCGG TGCGCTCGCC GGGCGTCGGC
GGCGACCTGT GGATCATGGG CCTGTGGATG GCCGGCCTCG GCACCATCCT CGGCGCGGTC
AACTTCATCA CCACGATCAT CTGCATGCGC GCGCCCGGCA TGACGATGTT CCGGATGCCG
ATCTTCGTGT GGAACACGCT GGTCACCAGC CTGCTCGCAC TGATCGTCTT CCCGGTCCTC
GCCGGCGCGC TGCTCTCGCT CGAGGCCGAC CGCCAGCTGG GCGCCCACGT CTTCGACACC
TCGCACGGCG GCGCCATCTT GTGGCAGCAC CTGTTCTGGT TCTTCGGCCA CCCCGAGGTG
TACATCATCG CGTTGCCGTT CTTCGGCATC GTGACCGAGA TCCTCCCGGT GTTCAGCCGC
AAGCCGATCT TCGGCTACAT CGGCCTGGTC GGCGCGACCC TCGGCATCGC CGTCCTCTCG
GTCGCCGTGT GGGCGCACCA CATGTTCGTC ACCGGCGCCG TGGACCTGCC GTTCTTCTCC
GGCATGACCT TCCTGATCGC CGTACCGACC GGGGTGAAGT TCTTCAACTG GATCGGCACG
ATGTGGGGCG GGTCGTTGTC GTTCGACACC CCGATGCTGT GGTCGATCGG CTTCTTGACG
ACGTTCCTGT TCGGCGGCCT GACCGGCGTG ATCCTGGCCA GCCCGCCGCT GGACTTCCAC
GTCTCCGACT CCTACTTCGT GGTCGCGCAC TTCCACTACG TCGTCTTCGG CACCGTCGTG
TTCGCGATGT TCGCCGGCTT CTACTACTGG TGGCCGAAGA TGACCGGCCG GATGCTCGAC
GAGCGGCTCG GCCGGCTCCA CTTCTGGCTG CTGTTCATCG GCTTCCACAC CACGTTCCTG
GTCCAGCACT GGCTCGGCGT CGAGGGCATG CCGCGGCGCT ACGCCGACTA CCTGCCGGGC
GACGGCTTCA CGACGCTCAA CCAGGTGTCG ACGATCGGCG CGTTCCTGCT CGGCGCCTCC
ACGCTGCCGT TCCTCTACAA CGTCTACATC TCGCGTCGCT CGCCGCTGGT CACCACGGAC
GACCCGTGGG GCTGGGGCCG GTCGCTGGAG TGGGCCACGA GCTGCCCGCC GCCGCGCCAC
AACTTCGTGA CCATCCCGCG GATCCGCTCG GAGTCGCCGG CGTTCGACCT GCACCACCCC
GAGGTCGCGG CGATCGAGTT GGAGGACAAC GAGGCCGCCC GGGTGGGCGC ACCTGCCGAC
GCACCTGACA TGGAGGGCCG CGAGGAGATG CTCCGCGACC GCAACACCGA CCCGGAGGGC
AACGCCTGA
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| Protein sequence | MTATAAPSTT ITARPPLGQQ LARIMTTTDH KVIGKLYLGT SFAWFLIGGL MAMLIRSELA
YPGMQVVNDE VYNQLFTMHG TIMLLLFATP LFFGFANVIM PLQIGSPDVA FPRLNMLSYW
LFLFGGLIAA SGFLTPSGAA DFGWFAYTPL SDAVRSPGVG GDLWIMGLWM AGLGTILGAV
NFITTIICMR APGMTMFRMP IFVWNTLVTS LLALIVFPVL AGALLSLEAD RQLGAHVFDT
SHGGAILWQH LFWFFGHPEV YIIALPFFGI VTEILPVFSR KPIFGYIGLV GATLGIAVLS
VAVWAHHMFV TGAVDLPFFS GMTFLIAVPT GVKFFNWIGT MWGGSLSFDT PMLWSIGFLT
TFLFGGLTGV ILASPPLDFH VSDSYFVVAH FHYVVFGTVV FAMFAGFYYW WPKMTGRMLD
ERLGRLHFWL LFIGFHTTFL VQHWLGVEGM PRRYADYLPG DGFTTLNQVS TIGAFLLGAS
TLPFLYNVYI SRRSPLVTTD DPWGWGRSLE WATSCPPPRH NFVTIPRIRS ESPAFDLHHP
EVAAIELEDN EAARVGAPAD APDMEGREEM LRDRNTDPEG NA
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