| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3118 |
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| Symbol | |
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| ID | 4595548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 3321512 |
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| End bp | 3322426 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 639777724 |
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| Product | type II secretion system protein |
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| Protein accession | YP_924307 |
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| Protein GI | 119717342 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2064] Flp pilus assembly protein TadC |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.803425 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGCTGC TCCTCGGTGC CCTGCTGCTC GCGGTCTCGG TCCTGCTGCT CGCCGCCGCC
CTCGGGGAGG GCCGGGACGC CCGGGGCGTG GGCCGTTCGC TGGAGCTGGT CCGGGCCGCC
TCGGCGTCGC CCGAGGTGGT GACCCGCGAG GCGGAGGTGC CGTTCGGCGA GCGGGTGCTC
GACCCGCTCC GCGAGCGCAC CCTGGGCCTC GGCCGCCGGC TCGCCGGCCA CGAGGCCGCG
GACCGGATCC GGCACCGGCT CGACCTGGCC GGGAACCCGC CCGGCTGGAC CGTCGACCGC
TACCTGACCG GGACGGTCCT GGGCGCGGCC CTGGGGCTGG TCGGTGCCGG CCTGCTCGGC
CTGCTGCTGG AGCCGGCTAC GCCGGTCCTC GTGCTGCTGC TCGCGGCCGG GCTCGTCCTC
GGCTACTTCG GGCCGCGGTT GTACCTCTAC CAGAAGAGCT ACGACCGGTC CGAGCGGATC
CGCCGGGCGC TGCCCGACGC GATCGACCTG CTCACGATCA GCGTCGAGGC CGGGCTCGGC
TTCGACGCGG CCGTCCAGCA GGTCGCCCAG CACACCGAGG GGCCGCTCGC CGACGAGCTG
TCCCGGGTGC TCCGGGAGAT GCAGCTCGGG CAGAGCCGGT CGGCGGCGCT GCGCTCCCTG
TCCGCCCGCA CGACGGTGCC CGAGCTGCGC GGCTTCGTCG GCGCGATGGT GCAGGCCGAC
GCGCTCGGCA TCCCGATCGC GCAGGTGCTG CGAGTCCAGT CCCGGGAGAT CCGGGTCAAG
CGCCGGCAGC ACGCCGAGGA GCGCGCCCAG CAGGTGCCGG TGAAGATCAC GGTCCCGCTG
ATCTTCTGCA TCCTGCCGTG CCTGTTCGTG GTGGTGCTCG GGCCGGCGGT CCTCAACATC
ATGGACACGT TCTGA
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| Protein sequence | MPLLLGALLL AVSVLLLAAA LGEGRDARGV GRSLELVRAA SASPEVVTRE AEVPFGERVL
DPLRERTLGL GRRLAGHEAA DRIRHRLDLA GNPPGWTVDR YLTGTVLGAA LGLVGAGLLG
LLLEPATPVL VLLLAAGLVL GYFGPRLYLY QKSYDRSERI RRALPDAIDL LTISVEAGLG
FDAAVQQVAQ HTEGPLADEL SRVLREMQLG QSRSAALRSL SARTTVPELR GFVGAMVQAD
ALGIPIAQVL RVQSREIRVK RRQHAEERAQ QVPVKITVPL IFCILPCLFV VVLGPAVLNI
MDTF
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