| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3117 |
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| Symbol | |
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| ID | 4595547 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 3320530 |
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| End bp | 3321510 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 639777723 |
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| Product | type II secretion system protein |
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| Protein accession | YP_924306 |
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| Protein GI | 119717341 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4965] Flp pilus assembly protein TadB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.193846 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTGGC TCCTGGTCAG CGGTGCGGTC GCGGTCGGCC TGGGGCTGCT CACCGCGCTG
CTGCTGCTCG CCGGCCCCGC TCGGTCGGCG GAGCCGACGC CGGCGGAACG GGTGACGGCG
TACGTCGGCG CGGCCGGCGA CGGCGGCACG GCGATCCTGT CCGCCGGCCA CCGCCCCGAC
GCGCTCGCCC AGGCGAGCGG TGCCGCCGCC CGGGTGCTGC GGAGCAACCG CGGGCTCGAG
GACCGGATCC GGCACCGGCT CGAGGGAGCG GGCAGTCACC TCGAGTCCGC CGAATGGTTG
CTGCTGCACA CGGCGGTCTT CGTGCTCACC GGGCTGGTCG GGCTGCTGCT CGGCACCGGC
AACGTGGTGC TGTTCGTGCT GTTCCTGGTC GTGGGCGCCG TCGGGCCGTG GCTCTACCTC
GGCGTGCGCC GCGGACGGCG GCGCAAGGCG TTCAGCGCCG CCGTGCCGGA GACCCTGCAG
CTGATGTCGG GGTCGCTCTC GGCGGGGCTG TCGCTCGCGC AGTCCGCCGA GACGGTCACC
CGCGAAGGCG CCGACCCGGT CGCCGCGGAG TTCCGCCGGG CGCTCGTCGA GACCCGCCTC
GGCGTGCCGC TGGAGGATGC GCTCGAGGGC GTCGCCGACC GGTTCGACAG CGCGGACCTG
GCCTGGGCGG TGATGGCGAT CCGGATCCAG CGCCAGGTGG GCGGCAACCT CGCGGAGCTG
CTCGACACCG TCGCCGAGAC GATGCGCGAG CGCGAGTACG TCCGGCGGCA GGTCGCGGCC
CTGTCCGCCG AGGGCCGGCT CTCCGCCTGG GTGCTCGGCT CGCTGCCGGT GGCCTTCCTG
ACCTACCTCC TGCTGGTCAA CCGCGAGTAC GTGATGCCGC TGTTCGAGGA CCCGCGCGGG
ATCGTGCTGC TCGCCGGGGC GGCGCTGTGG CTGGCGGTCG GGGCGTTCTG GATGAGTCGC
CTGGTCCGGG TGGAGGTCTG A
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| Protein sequence | MNWLLVSGAV AVGLGLLTAL LLLAGPARSA EPTPAERVTA YVGAAGDGGT AILSAGHRPD
ALAQASGAAA RVLRSNRGLE DRIRHRLEGA GSHLESAEWL LLHTAVFVLT GLVGLLLGTG
NVVLFVLFLV VGAVGPWLYL GVRRGRRRKA FSAAVPETLQ LMSGSLSAGL SLAQSAETVT
REGADPVAAE FRRALVETRL GVPLEDALEG VADRFDSADL AWAVMAIRIQ RQVGGNLAEL
LDTVAETMRE REYVRRQVAA LSAEGRLSAW VLGSLPVAFL TYLLLVNREY VMPLFEDPRG
IVLLAGAALW LAVGAFWMSR LVRVEV
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